DRSC/TRiP Functional Genomics Resources

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Protein Alignment: boca and Mesd

Sequence 1:NP_724578.1 Gene:boca FlyBaseID:FBgn0004132 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_075892.3 Gene:Mesd MGIID:1891421 Length:224 Species:Mus musculus

Alignment Length:177 Identity:86/178 (48%)
Similarity:122/178 (69%) Gaps:9/178 (5%)


  Fly     4 RLVLLLLALTPLVL--------AKKFKEEEKPAWAKKDIRDYSEADLERLLDQWEEDEEPLEDDE 60
            |.|||.|..:.|:|        |....|...|...|||||||::||:.|||:|||:|:: :|:.:
Mouse     8 RAVLLFLCASDLLLLPPPNAYAADTPGEATPPPRKKKDIRDYNDADMARLLEQWEKDDD-IEEGD 71

  Fly    61 LPEHLRPQPKLDLSNLDSKSPEDLLKVSKKGRTLMTFVSVTGNPTREESDTITKLWQTSLWNNHI 125
            ||||.||...:|.|.||...||.:||::|||:|||.||:|:||||.:|::.||.|||.||:|.:.
Mouse    72 LPEHKRPSAPIDFSKLDPGKPESILKMTKKGKTLMMFVTVSGNPTEKETEEITSLWQGSLFNANY 136

  Fly   126 QAERYMVDDNRAIFLFKDGTQAWDAKDFLIEQERCKGVTIENKEYPG 172
            ..:|::|..:||||:.:||:.||:.||||:.|:||..||:|.:.|||
Mouse   137 DVQRFIVGSDRAIFMLRDGSYAWEIKDFLVSQDRCAEVTLEGQMYPG 183

Known Domains:


GeneSequenceDomainRegion External IDIdentity
bocaNP_724578.1 Mesd 31..178 CDD:287194 76/143 (53%)
MesdNP_075892.3 Chaperone domain. {ECO:0000269|PubMed:21397183} 1..155 70/148 (47%)
Mesd 43..192 CDD:287194 76/143 (53%)
Escort domain. {ECO:0000269|PubMed:21397183} 156..195 15/29 (52%)
Prevents secretion from ER 221..224
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C256677438
eggNOG 1 0.900 E1_KOG4357
Hieranoid 1 1.000
Homologene 1 1.000 H11347
Inparanoid 1 1.050 176 1.000 Inparanoid score I4025
Isobase 00.000 Not matched by this tool.
OMA 1 1.010
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0004891
OrthoInspector 1 1.000 T1083486
orthoMCL 1 0.900 OOG5_133284
Panther 1 1.100 LDO PTHR17600
Phylome 1 0.910 0.667 Consistency score
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R4085
TreeFam 1 0.960
1312.790

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