DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and syk

DIOPT Version :10

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_005155595.1 Gene:syk / 405769 ZFINID:ZDB-GENE-040702-3 Length:608 Species:Danio rerio


Alignment Length:638 Identity:174/638 - (27%)
Similarity:267/638 - (41%) Gaps:164/638 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YTFG-------QTHINSSGGGNMGGVLGQKHN--NGGSLDSRY-------------------TPD 64
            |.||       :.::...|.|:...:|.|..:  .|.:|...|                   ...
Zfish    10 YFFGNITREESEVYLQQGGSGDGLYLLRQSRSFLGGYALSLSYGRQFYHYTIERELNDTYAIAGG 74

  Fly    65 PNHRGPLKIGGKGGVDII-------------------RPR-TTPTGVPGVVLKRVVVALYDYKSR 109
            .:||.|        :|:|                   ||| |.|...|...||..::..|..::.
Zfish    75 KSHRTP--------IDVINYHSQESDGLICLLKKPFHRPRGTEPKVGPFEDLKEQLIRQYVEQTW 131

  Fly   110 DESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPLNFVAEERSVNSEDWFFENVLRKEADK 174
            :      :||..::         ..:::...:.|.||..  .|.|:.    .||...:.|::::.
Zfish   132 N------LKGSALD---------QAIISQRPQLEKLIAT--TAHEKM----PWFHGKIDREDSEL 175

  Fly   175 LLLAEENPRGTFLVRPSEHN--PNGYSLSVKDWEDGRGYHVKHYRIKPLDNGGYYIATNQTFPSL 237
            .||......|.||:|..|::  ...|:|.:.     ....|.||||.....|...|...:.|.:|
Zfish   176 RLLNTSRVNGKFLIRQRENSGRNESYALCLL-----HNNQVMHYRIDKDRAGKLSIPDGKKFDTL 235

  Fly   238 QALVMAYSKENALGLCHILSRPCPKPQ------------------------------PQMWDLGP 272
            ..||..||.:.. ||..:|:..||:|.                              ...:.:.|
Zfish   236 WQLVEHYSYKPD-GLLRVLTETCPRPSHHSERGATGGIISRLKSYSFPKPGQKKGSAENPYKITP 299

  Fly   273 ELRDK------------------YEIPRSEIQLLR--------------KLGRGNFGEVFYGKW- 304
            ..:|.                  ||.|.::...||              :||.||||.|..|.: 
Zfish   300 NGKDDYSKQGNFLDSAMPMDTQVYESPYADPDELRSTKVNRSDLTLEDGELGSGNFGTVLRGVYQ 364

  Fly   305 --RNSIDVAVKTLREGTMSTAA---FLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGS 364
              :....||||.|:....:.|.   .|:||.:|::..:..:|.:..:| :.|.:.:|.|....|.
Zfish   365 MKKTQKVVAVKILKNDDDNAAVKDEMLREANVMQQLDNPYIVRMIGIC-EAENLMLVMELAELGP 428

  Fly   365 LLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARV 429
            |..||::  .:::..::|..:..||:.||:|||....:||||||||||:...:.|||.||||::.
Zfish   429 LHKFLQK--NKHITVKNLTELVHQVSMGMKYLEEHNFVHRDLAARNVLLVTQHYAKISDFGLSKA 491

  Fly   430 IADDE--YCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIE 492
            :.:||  |..|...::|:||.|||.:.|.|||.||||||:|:|:.|.|:|||.||.||...|||:
Zfish   492 LTEDENYYKAKGHGKWPLKWYAPECMNYLKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVIQ 556

  Fly   493 NIERGFRMPKPTNHYFPDNIYQLLLQCWDAVPEKRPTFEF----LNHYFESFS 541
            .||.|.||..|.:  .|..:|.|:.:||...|::||.|..    |.||:...|
Zfish   557 MIENGQRMSAPPD--CPPEMYDLMKKCWTYKPDERPGFSVVEPRLRHYYYDIS 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH2_Src_family 158..259 CDD:199827 28/102 (27%)
PTKc_Src_like 289..538 CDD:270630 105/274 (38%)
SH3_Src_like 99..150 CDD:212779 6/50 (12%)
sykXP_005155595.1 SH2_N-SH2_Zap70_Syk_like 8..111 CDD:198191 19/108 (18%)
SH2_C-SH2_Syk_like 159..260 CDD:198264 31/110 (28%)
PTKc_Syk 348..604 CDD:133247 104/260 (40%)

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