DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and ret

DIOPT Version :10

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_012822323.2 Gene:ret / 100495902 XenbaseID:XB-GENE-485176 Length:1102 Species:Xenopus tropicalis


Alignment Length:349 Identity:124/349 - (35%)
Similarity:174/349 - (49%) Gaps:53/349 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 QTFPSLQALVMAYSKENALGLCHILSRPCPKPQPQMWDLG----PELRDKYEIPRSEIQLLRKLG 292
            |::|      ::||..||       .||..........:.    || ..|:|.||..:.|.:.||
 Frog   669 QSYP------VSYSSNNA-------RRPSLDSMENQVSVDTFKIPE-DPKWEFPRKNLVLGKTLG 719

  Fly   293 RGNFGEV-------FYGKWRNSIDVAVKTLREGTMSTAA--FLQEAAIMKKFRHNRLVALYAVCS 348
            .|.||:|       ..|| .....||||.|:|....:..  .|.|..::|:..|..::.||..|:
 Frog   720 EGEFGKVVKATAFRLKGK-AGYTTVAVKMLKESASQSELRDLLSEFNLLKQVNHPHVIKLYGACT 783

  Fly   349 QEEPIYIVQEYMSKGSLLDFLREG----------------------DGRYLHFEDLIYIATQVAS 391
            |:.|::::.||...|||..||||.                      |.|.|...|||..|.|::.
 Frog   784 QDGPLHLIVEYAKYGSLRSFLRESRKVGPSSLGGDSNRNSSYLDNPDERALTMGDLISFAWQISR 848

  Fly   392 GMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLAR-VIADDEYCPKQGSRFPVKWTAPEAIIY 455
            ||:||...:|:||||||||||:.|....||.||||:| |..:|.|..:...|.||||.|.|::..
 Frog   849 GMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD 913

  Fly   456 GKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIYQLLLQCW 520
            ..::.:|||||:|:||.|:.|.|..||||:....:...::.|:||.||.|  ..|.:|.|:|:||
 Frog   914 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMEKPEN--CSDEMYNLMLKCW 976

  Fly   521 DAVPEKRPTFEFLNHYFESFSVTS 544
            ...|:|||||..::...|...|.|
 Frog   977 KQEPDKRPTFGEISKELEKMMVKS 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH2_Src_family 158..259 CDD:199827 6/26 (23%)
PTKc_Src_like 289..538 CDD:270630 106/280 (38%)
SH3_Src_like 99..150 CDD:212779
retXP_012822323.2 RET_CLD1 20..140 CDD:465485
CA_like 160..242 CDD:481204
RET_CLD3 252..368 CDD:465516
RET_CLD4 392..494 CDD:465517
PTKc_RET 711..1000 CDD:173631 109/291 (37%)
Blue background indicates that the domain is not in the aligned region.

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