DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and srms

DIOPT Version :10

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001129722.2 Gene:srms / 100192213 ZFINID:ZDB-GENE-081022-95 Length:492 Species:Danio rerio


Alignment Length:480 Identity:183/480 - (38%)
Similarity:293/480 - (61%) Gaps:39/480 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 GGVDIIRPRTTPTGVPGVVLKRVVVALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLT-T 140
            |.:.:..|:..|.        ::..||:|:.:|.|.:||..:||::.|| :...|:.....|| :
Zfish    38 GDIRVPAPKKKPA--------QLYAALFDFVARSEEELSVKEGDKLSVI-EKRGDYVFAKKLTGS 93

  Fly   141 RQEGLIPLNFVA--EERSVNSEDWFFENVLRKEADKLLLAEENPRGTFLVRPSEHNPNGYSLSVK 203
            .:.||||.|:||  ::...|.: |::.|:.|::|:||||:.||..|:||||.||.:.:.|::|.:
Zfish    94 LESGLIPANYVALLKDEFANYK-WYYGNINRQKAEKLLLSSENKTGSFLVRISESHSDEYTISAR 157

  Fly   204 DWEDGRGYHVKHYRIKPLDNGGYYIATNQTFPSLQALVMAYSKEN-ALGLCHILSRPCPKPQPQM 267
            ....     |.|:||.....|.|:::...:|.:|..|:..|.:.: :|| ||| .:||.: :.::
Zfish   158 SENS-----VFHFRIHRSPIGAYFVSEKISFGTLDELIRYYQQNSRSLG-CHI-DQPCVQ-RREL 214

  Fly   268 WDLGPELRDKYEIPRSEIQLLRKLGRGNFGEVFYGKWR-NSIDVAVKTLREGTMSTAAFLQEAAI 331
            :|:.|     :|.||.|..|::|||.|:||||:...|: ....||:|.|::.......|::|...
Zfish   215 FDMEP-----WERPREEFMLVKKLGEGHFGEVWEAIWKTQKKKVAIKMLKQEDTKLDEFVKEVHA 274

  Fly   332 MKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYL 396
            :|...|.:|:.|.|:||:.||:|||.|.|:||||..:|...:|:.|....|||:|.|:|.||.||
Zfish   275 LKNLHHPKLIELLALCSRGEPVYIVTELMAKGSLKSYLSSAEGQLLTSAHLIYMAAQIAEGMAYL 339

  Fly   397 ESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIK 461
            |.:.::||||||||:|:|.:.|.|:.||||||:|.|..:...:.::.||:||||||.:|.:||:|
Zfish   340 EDRHIVHRDLAARNILVGNDLVCKVADFGLARIIKDSVFTASKTTKIPVRWTAPEAALYQRFSVK 404

  Fly   462 SDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIYQLLLQCWDAVPEK 526
            |||||:|:||.|:.:.|::||.|..::||:|.:..|:|:..| || .|.|||:::|:||:....|
Zfish   405 SDVWSFGVLLYEMMSRGKMPYDGKTNKEVMEALSSGYRLACP-NH-CPPNIYRIMLECWNNEASK 467

  Fly   527 RPTFEFLNH---------YFESFSV 542
            ||:|..|:.         ||::..|
Zfish   468 RPSFHALHSQLDNIYSRLYFKTIEV 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH2_Src_family 158..259 CDD:199827 35/101 (35%)
PTKc_Src_like 289..538 CDD:270630 113/258 (44%)
SH3_Src_like 99..150 CDD:212779 18/51 (35%)
srmsNP_001129722.2 SH3 52..106 CDD:473055 20/54 (37%)
SH2 116..193 CDD:425423 28/81 (35%)
Protein Kinases, catalytic domain 220..481 CDD:473864 117/262 (45%)

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