DRSC/TRiP Functional Genomics Resources

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Protein Alignment: NimC3 and Tnfaip6

Sequence 1:NP_524928.2 Gene:NimC3 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_445834.1 Gene:Tnfaip6 RGDID:621359 Length:275 Species:Rattus norvegicus

Alignment Length:11 Identity:4/12 (33%)
Similarity:6/12 (50%) Gaps:0/12 (0%)


  Fly   105 SYCAEPDRCHC 115
            :||..|:...|
  Rat   125 AYCYNPNAKEC 135

Known Domains:


GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 4/12 (33%)
Tnfaip6NP_445834.1 Link_domain_TSG_6_like 36..128 CDD:239592 2/3 (67%)
CUB 135..244 CDD:278839 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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