DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: NimC3 and dkk2

Sequence 1:NP_524928.2 Gene:NimC3 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001104679.1 Gene:dkk2 ZFINID:ZDB-GENE-080204-14 Length:243 Species:Danio rerio

Alignment Length:242 Identity:55/243 (23%)
Similarity:81/243 (33%) Gaps:85/243 (35%)


  Fly     9 MLVLVLMTIHLVEVSSLAITNGHCQKNISVKYQVP-VAKTRMAGA---GPPNAS------HPIDL 63
            ||.|::..:.:.|...:   ....|.| |:|...| .|....:||   |.|..|      :|...
Zfish    12 MLPLIVAFVRMGETQGI---ESQAQVN-SIKSLEPQPAAANRSGASYSGIPKKSNIPAQGYPCSS 72

  Fly    64 DSYVVY--------------------EERVRWDNIQVCCPGYRTILFGFCEPVCQEACPAHSYCA 108
            |...|.                    ::|...||  :||||.|...: .|.|:.:.|..:|....
Zfish    73 DKECVVGTYCHSPQHAPSRRLSCRRRKKRCHRDN--MCCPGNRCSNY-ICIPISESALSSHKSSM 134

  Fly   109 ----------------------------EPDRC----HCQRGYEPSHHHTTGHQLICRPVCQGG- 140
                                        |.|.|    .|..||..:.|..|   .||:||.:.| 
Zfish   135 DENNKFSIKEKNWKKNGKAHAKISLKGHEGDPCLRSSDCSEGYCCARHFWT---KICKPVLRQGE 196

  Fly   141 -CPEHSHCVAH-----NECECWPG-----FKDASSWFSLSLR-CERV 175
             |.:.....:|     ..|:|..|     :|||:|:....|. |:|:
Zfish   197 VCTKQRKKGSHGLEIFQRCDCAKGLACKVWKDATSFSRSRLHVCQRI 243

Known Domains:


GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 30/137 (22%)
dkk2NP_001104679.1 Dickkopf_N 70..120 CDD:282549 11/53 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.