DRSC/TRiP Functional Genomics Resources

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Protein Alignment: NimC3 and Pear1

Sequence 1:NP_524928.2 Gene:NimC3 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_008759360.1 Gene:Pear1 RGDID:1305653 Length:1040 Species:Rattus norvegicus

Alignment Length:129 Identity:34/130 (26%)
Similarity:48/130 (37%) Gaps:46/130 (35%)


  Fly    68 VYEERVRWDN---IQVCCPGYRTILFGFCEPVCQEACPAHSYCAEPDRCHCQRGYEPSHHHTTGH 129
            ||.:.|:.|:   :| ||.||.. ..|.|.|:|.:.| .|..|..|:||.|..|:.         
  Rat    73 VYRQVVKMDSRPRLQ-CCGGYYE-SSGACVPLCAQEC-VHGRCVAPNRCQCAPGWR--------- 125

  Fly   130 QLICRPVCQGGCPEHSHCVAHNEC--ECWPGFKDASSWFSLSLRCERV-QCGHEQRFDPGRRAC 190
                                .::|  ||.||.     |   ..:|:|: .||:....||....|
  Rat   126 --------------------GDDCSSECAPGM-----W---GPQCDRLCLCGNSSSCDPRSGVC 161

Known Domains:


GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 26/110 (24%)
Pear1XP_008759360.1 EMI 25..93 CDD:284877 9/21 (43%)
EGF_CA 535..580 CDD:304395
Laminin_EGF 620..665 CDD:278482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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