DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: NimC3 and dsl-6

Sequence 1:NP_524928.2 Gene:NimC3 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_502148.2 Gene:dsl-6 WormBaseID:WBGene00001108 Length:303 Species:Caenorhabditis elegans

Alignment Length:119 Identity:31/120 (26%)
Similarity:45/120 (38%) Gaps:35/120 (29%)


  Fly    84 GYRTIL------FG-----FCEPVCQEACPAHSYCAEPDRCHCQRGYEPSHHHTTG---HQLICR 134
            |.|.|:      ||     ||:.:.|.   .|.     .||: .||.....:..||   .::|..
 Worm   114 GLRIIIECDENWFGEKCDVFCDNIEQR---LHG-----KRCN-YRGVPSCLNMFTGAGCMKMITP 169

  Fly   135 PVCQGGCPEHSHCVAHNE---CECWPGFK-DASSWF------SLSLRCERVQCG 178
            ..|  .|..:..||...|   |||..||| |.....      :::::.|.:.||
 Worm   170 MDC--SCKNNGKCVDSAETPICECTRGFKGDTCEEMHETIKAAINVQQEEIGCG 221

Known Domains:


GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 30/119 (25%)
dsl-6NP_502148.2 DSL 101..163 CDD:128366 15/58 (26%)
EGF_CA <174..201 CDD:238011 11/27 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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