DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC3 and dsl-2

DIOPT Version :10

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_500052.1 Gene:dsl-2 / 176938 WormBaseID:WBGene00001104 Length:322 Species:Caenorhabditis elegans


Alignment Length:151 Identity:34/151 - (22%)
Similarity:48/151 - (31%) Gaps:45/151 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ISVKYQVPVAKTRMAG-----------AGPPNASH-PIDLDSYVVYEERVR-WDNIQVCCPGYRT 87
            ||::.|....|:|...           .|..|... |...|..||..:..| |            
 Worm    74 ISIRLQTKFMKSRYGSRNWHMVVFDPLQGIINVDQLPRPFDGMVVKVKCERNW------------ 126

  Fly    88 ILFG-FCEPVCQEACPAH---SYCAEPDRCHCQRGYEPSHHHTTGHQLICRPVCQGGCPEHSHCV 148
              || :|:..|.|.. ||   ..|.:.....|..|:...:...|..|  |..:|  .|...:.|.
 Worm   127 --FGEYCDKYCDEDA-AHLVGMRCNKKGVMGCNEGFCGPNCDQTKSQ--CSMMC--ACENDAPCY 184

  Fly   149 AHNE---------CECWPGFK 160
            :..:         |||..||:
 Worm   185 SSTDPRTSREYVYCECLTGFE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 None
dsl-2NP_500052.1 DSL 102..164 CDD:128366 18/76 (24%)

Return to query results.
Submit another query.