DRSC/TRiP Functional Genomics Resources

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Protein Alignment: NimC3 and ced-1

Sequence 1:NP_524928.2 Gene:NimC3 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_740922.1 Gene:ced-1 WormBaseID:WBGene00000415 Length:1111 Species:Caenorhabditis elegans

Alignment Length:201 Identity:45/202 (22%)
Similarity:58/202 (29%) Gaps:99/202 (49%)


  Fly    75 WDNIQVCCPGYRTILFGFCEP-----VCQEACPAHSY---CAE--------------PDRCHCQR 117
            |::...|.|...:.:   |:|     .|.|.||...|   ||.              ..:|.|.|
 Worm   433 WNHASECNPETGSCV---CKPGRTGKNCSEPCPLDFYGPNCAHQCQCNQRGVGCDGADGKCQCDR 494

  Fly   118 GYEPSHHHTTGHQ-----------------------LICRPV--------------CQGGCPEHS 145
            |:       |||:                       :.|.|:              |..||||.|
 Worm   495 GW-------TGHRCEHHCPADTFGANCEKRCKCPKGIGCDPITGECTCPAGLQGANCDIGCPEGS 552

  Fly   146 -------HCVAHN--------ECECWPGF--KDASSWFS---------LSLRCERVQCGHEQRFD 184
                   ||...|        ||.|.|||  .|.|:..|         ||..|....|..:    
 Worm   553 YGPGCKLHCKCVNGKCDKETGECTCQPGFFGSDCSTTCSKGKYGESCELSCPCSDASCSKQ---- 613

  Fly   185 PGRRAC 190
            .|:..|
 Worm   614 TGKCLC 619

Known Domains:


GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 42/192 (22%)
ced-1NP_740922.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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