DRSC/TRiP Functional Genomics Resources

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Protein Alignment: NimC3 and scarf1

Sequence 1:NP_524928.2 Gene:NimC3 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_001344375.3 Gene:scarf1 ZFINID:ZDB-GENE-030131-8778 Length:888 Species:Danio rerio

Alignment Length:132 Identity:36/133 (27%)
Similarity:51/133 (38%) Gaps:34/133 (26%)


  Fly    76 DNIQVCCPGYRTILFGFCEPVC--QEACPAHSYCAEPDRCHCQRGYEPSHHHTTGHQLICR---- 134
            |:..:||.|:.........|:|  :.||.....|..|..|.|:.|:       .|:|  |:    
Zfish    35 DSSAICCSGWGQSGDECTVPLCEGERACLQDEVCVYPGLCRCKAGF-------YGYQ--CKAPCP 90

  Fly   135 -----PVCQGGCPEHSHCV---AHNECECWPGFKDASSWFSLSLRCER-VQCGHEQRFDP--GRR 188
                 |.|:..||.|.|.:   |...|.|.|     :.|.||   |:. .:||...:.||  |..
Zfish    91 PEFWGPDCREFCPCHPHGLCDPATGVCSCLP-----NRWGSL---CQNSCKCGRHGKCDPVYGNC 147

  Fly   189 AC 190
            .|
Zfish   148 TC 149

Known Domains:


GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 32/124 (26%)
scarf1XP_001344375.3 EGF_CA 361..401 CDD:304395
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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