DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-13C and Ppef1

DIOPT Version :10

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001421152.1 Gene:Ppef1 / 317498 RGDID:1562772 Length:664 Species:Rattus norvegicus


Alignment Length:281 Identity:92/281 - (32%)
Similarity:138/281 - (49%) Gaps:40/281 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KSREILLAQPILLELEA-PLK---ICGDIHGQYYDLLRLFEYGGYPPEAN-YLFLGDYVDRGKQS 98
            ::|:||...|....::. |.|   ||||:||:..||:.:|...|.|.|.| |:|.||:||||..|
  Rat   170 EARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLMLIFYKNGLPSEKNPYVFNGDFVDRGNNS 234

  Fly    99 LETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYTI---KLWKTFTDCFNCLPVV 160
            :|.:.:||...:.|..:..|.|||||...:|..|||..|..::|.:   |:.:...:.:..||:.
  Rat   235 MEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGKKILQVLEELYTWLPIG 299

  Fly   161 AIVDEKIFCCHGGL--SPDLTSMEQIRR------IMRPTDVPDQ--------------------- 196
            .|:|.:|...|||:  |.||..::|::|      :|.|.....:                     
  Rat   300 TIIDNEILVIHGGISESTDLNILQQLQRNKMKSVLMPPMSTNQECNIKKNKAGPSEQSASEQLTK 364

  Fly   197 ---GLLCDLLWSDPDKDTIGWGENDRGVSFTFGAEVVVKFLQKHDLDLICRAHQVVEDGYEFFAK 258
               ..:.|||||||......:....||....||.:|..|.|.|:.|.::.|:|:...||||....
  Rat   365 LEWEQIIDLLWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLNKNQLKMVIRSHECKPDGYEICHD 429

  Fly   259 RQLVTLFSAPNYCGEFDNAGA 279
            .:::|:|||.||..|..|.||
  Rat   430 GKVITVFSASNYYEEGSNRGA 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 MPP_PP1_PPKL 6..296 CDD:277359 92/281 (33%)
Ppef1NP_001421152.1 IQ 40..>57 CDD:197470
MPP_RdgC 140..466 CDD:277364 92/281 (33%)
FRQ1 498..660 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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