DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-13C and SPOM_SPBC3F6.01C

DIOPT Version :10

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_596740.1 Gene:SPOM_SPBC3F6.01C / 2541004 PomBaseID:SPBC3F6.01C Length:473 Species:Schizosaccharomyces pombe


Alignment Length:265 Identity:101/265 - (38%)
Similarity:153/265 - (57%) Gaps:9/265 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 REILLAQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSLE 100
            :|:|...|.|:::    :..|.||||.||||:|||.:|:..|.| |...|||.||:||||..|.|
pombe   192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRGSWSTE 256

  Fly   101 TICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVVAIVDE 165
            ....|.|||:.|.:..|:.|||||...:|::|||..||:.:|..:.:..|::.|:.||:.:::.:
pombe   257 VAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFSLLPLGSLISD 321

  Fly   166 KIFCCHGGL-SPDLTSMEQIRRIMR-PTDVPDQ-GLLCDLLWSDPDKDTIGWGENDRGVSFTFGA 227
            .....|||| |.|..:::|:|.|.| ....|.| ||:.::||:|| :...|.|.:.|||...||.
pombe   322 SYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP-QPAPGRGPSKRGVGLQFGP 385

  Fly   228 EVVVKFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDNTLMCSFQ 292
            :|..:|.:.:.|..:.|:|:|.:.|||.......:|:|||||||....|.||::.|...:...|.
pombe   386 DVSKRFCEANGLKAVIRSHEVRDQGYEVEHDGYCITVFSAPNYCDSTGNLGAVIKVKEDMELDFH 450

  Fly   293 ILKPV 297
            ..:.|
pombe   451 QFEAV 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 MPP_PP1_PPKL 6..296 CDD:277359 100/262 (38%)
SPOM_SPBC3F6.01CNP_596740.1 PLN03088 1..>121 CDD:215568
TPR repeat 5..33 CDD:276809
TPR repeat 38..68 CDD:276809
TPR repeat 73..101 CDD:276809
MPP_PP5_C 152..467 CDD:277362 101/265 (38%)
Blue background indicates that the domain is not in the aligned region.

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