DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-13C and gsp-1

DIOPT Version :10

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001256250.1 Gene:gsp-1 / 179486 WormBaseID:WBGene00001747 Length:329 Species:Caenorhabditis elegans


Alignment Length:298 Identity:258/298 - (86%)
Similarity:277/298 - (92%) Gaps:0/298 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LNLESIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREILLAQPILLELEAPLKICGDIHGQYYD 69
            ||::::|:|||||||.||||.|.:||.|||.||.|||||.|:|||||||||||||||||||||.|
 Worm     7 LNIDNLITRLLEVRGCRPGKPVTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQYND 71

  Fly    70 LLRLFEYGGYPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGF 134
            |||||||||:||||||||||||||||||||||||||||||:||.|||||||||||||||||||||
 Worm    72 LLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGF 136

  Fly   135 YDECKRRYTIKLWKTFTDCFNCLPVVAIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLL 199
            |||||||::|||||||||||||||:.|::|||||||||||||||.:||||||:||||||||.|||
 Worm   137 YDECKRRFSIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDTGLL 201

  Fly   200 CDLLWSDPDKDTIGWGENDRGVSFTFGAEVVVKFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTL 264
            |||||||||||..||||||||||||||.:||.|||.:||||||||||||||||||||||||||||
 Worm   202 CDLLWSDPDKDVTGWGENDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 266

  Fly   265 FSAPNYCGEFDNAGAMMSVDNTLMCSFQILKPVEKRKK 302
            ||||||||||||||.|||||.|||||||||||.||:.|
 Worm   267 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 MPP_PP1_PPKL 6..296 CDD:277359 252/289 (87%)
gsp-1NP_001256250.1 MPP_PP1_PPKL 8..298 CDD:277359 252/289 (87%)

Return to query results.
Submit another query.