DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-13C and gsp-4

DIOPT Version :10

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001379823.1 Gene:gsp-4 / 171960 WormBaseID:WBGene00020187 Length:305 Species:Caenorhabditis elegans


Alignment Length:35 Identity:12/35 - (34%)
Similarity:18/35 - (51%) Gaps:7/35 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VVVTIIYFAHIYFRRLPITLL-------PLIREEI 37
            |||.::..:.:.|..||.|.|       |:.|:||
 Worm     4 VVVYVLALSILLFFGLPNTTLARVQYGSPVSRKEI 38

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 MPP_PP1_PPKL 6..296 CDD:277359 12/35 (34%)
gsp-4NP_001379823.1 MPP_superfamily 6..297 CDD:472684 10/33 (30%)

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