DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-13C and rdgC

DIOPT Version :10

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_061512906.1 Gene:rdgC / 1278280 VectorBaseID:AGAMI1_002189 Length:877 Species:Anopheles gambiae


Alignment Length:314 Identity:106/314 - (33%)
Similarity:155/314 - (49%) Gaps:38/314 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LESIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREILLAQPILLE----LEAPLKICGDIHGQY 67
            ||.||...      |..|| :|....:.|:..::...|...|.|.:    :...:.||||:||:.
Mosquito   221 LEVIIDLF------RKKKN-RLHAKYVAGILREATSKLKRLPNLNQASTAISKQVTICGDLHGKL 278

  Fly    68 YDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRI 131
            .|||.:|...|.| ||..|:|.||:|||||:.||.:.|||...:.:....||.|||||...:|..
Mosquito   279 DDLLVVFHKNGLPSPENPYVFNGDFVDRGKKGLEVLLLLLCTFLVFPGGVFLNRGNHEDTVMNAR 343

  Fly   132 YGFYDECKRRY---TIKLWKTFTDCFNCLPVVAIVDEKIFCCHGGLSPDLTSMEQIR-------- 185
            |||..|..::|   ..:|.|...:.:..||:..||:.::...|||:| |.|.::.||        
Mosquito   344 YGFIREVHQKYKHNAERLLKLIDEVYRWLPLGTIVNNRVLVVHGGIS-DSTDLDLIRSLDRGKYI 407

  Fly   186 RIMRP------------TDVPDQGLLCDLLWSDPDKDTIGWGEND-RGVSFTFGAEVVVKFLQKH 237
            .::||            .|..:...:.|:||||| :.|.|...|. ||....||.:|..||||::
Mosquito   408 SLLRPPITESTAPGAEIIDKVEWKQVFDILWSDP-QHTEGCRPNSLRGAGTYFGPDVTSKFLQRY 471

  Fly   238 DLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDNTLMCSF 291
            .|..:.|:|:...||:|.....:::|:|||.||.....|.||.:.:|..|...|
Mosquito   472 KLQYLVRSHECKPDGHEIMHGGKVITIFSASNYYEIGSNKGAYLKLDPQLDTHF 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 MPP_PP1_PPKL 6..296 CDD:277359 106/314 (34%)
rdgCXP_061512906.1 None

Return to query results.
Submit another query.