DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTry and cfd

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:230 Identity:72/230 - (31%)
Similarity:121/230 - (52%) Gaps:12/230 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IVGGSATTISSFPWQISLQRSGSHSCGGSIYSANIIVTAAHCLQSVSASVLQVRAGSTYWSSGGV 95
            |.||......|.|:..|:|.:|.|.|||.:.|:..:::||||.|....|.::|..|:  .|..|.
Zfish    21 ITGGQEAKAHSRPYMASVQWNGKHECGGFLISSQWVMSAAHCFQDGRTSGVKVVLGA--HSLSGA 83

  Fly    96 VAKVSSFK----NHEGYNANTMVNDIAVIRLSSSLSFSSSIKAISL---ATYNPANGASAAVSGW 153
            .....:|.    ||..::.:...||||:|:|...::.|.::|.:..   .|.:|...|....:||
Zfish    84 EDTKQTFDAEVYNHPDFSISNYDNDIALIKLDKPVTQSDAVKPVKFQRDETADPKEAAVVETAGW 148

  Fly   154 GTQSSGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRNTMICAAASGKDACQGDSGGPLVSGG 218
            |:.:: ....|.:|..:::.::.:.:|..:.: ||.:..:.|:|||...||.|.|||||||:..|
Zfish   149 GSLNN-MGGRPDKLHELSIPVMERWRCGRADF-YGEKFTSNMLCAADKRKDTCDGDSGGPLLYRG 211

  Fly   219 VLVGVVS-WGYGCAYSNYPGVYADVAVLRSWVVST 252
            ::||:.| .|..|..|..||:|..::...||:.:|
Zfish   212 IVVGITSNGGKKCGSSRKPGLYTIISHYASWIDTT 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 70/225 (31%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 71/228 (31%)

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