DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTry and Tmprss5

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_695223.2 Gene:Tmprss5 / 266681 RGDID:628625 Length:445 Species:Rattus norvegicus


Alignment Length:263 Identity:97/263 - (36%)
Similarity:132/263 - (50%) Gaps:40/263 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CALGGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSANIIVTAAHCLQSVS 77
            |:..|..|      |..|||||.|.....:|||.|:.....|:||.|:.:...:||||||:.|..
  Rat   196 CSECGARP------LASRIVGGQAVASGRWPWQASVMLGSRHTCGASVLAPYWVVTAAHCMYSFR 254

  Fly    78 ASVLQVRAGSTYWSSGGVVAKVSSFKNHEG-----------YNANTMVNDIAVIRLSSSLSFSSS 131
            .|.|     |::....|:|:. |:.:.|:|           |:|.....|:|:::|.:.::||.:
  Rat   255 LSRL-----SSWRVHAGLVSH-SAVRQHQGTMVEKIIPHPLYSAQNHDYDVALLQLRTPINFSDT 313

  Fly   132 IKAISLATYNPA------NGASAAVSGWGTQSSGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQ 190
            :.|:.|    ||      .|:...|||||......:.....||...|.::|...|.||.. |...
  Rat   314 VSAVCL----PAKEQHFPQGSQCWVSGWGHTDPSHTHSSDTLQDTMVPLLSTDLCNSSCM-YSGA 373

  Fly   191 IRNTMICAA-ASGK-DACQGDSGGPLV--SGGV--LVGVVSWGYGCAYSNYPGVYADVAVLRSWV 249
            :.:.|:||. ..|: ||||||||||||  ||..  ||||||||.|||..|.|||||.||....|:
  Rat   374 LTHRMLCAGYLDGRADACQGDSGGPLVCPSGDTWHLVGVVSWGRGCAEPNRPGVYAKVAEFLDWI 438

  Fly   250 VST 252
            ..|
  Rat   439 HDT 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 91/241 (38%)
Tmprss5NP_695223.2 SRCR_2 106..203 CDD:464747 2/6 (33%)
Tryp_SPc 208..441 CDD:238113 91/243 (37%)

Return to query results.
Submit another query.