DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTry and Tmprss2

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:269 Identity:93/269 - (34%)
Similarity:134/269 - (49%) Gaps:41/269 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KIVILLSAVVCALGGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSANIIV 67
            ::|:.|..:.|.:...       :...||||||..:...:|||:||...|.|.|||||.:...||
  Rat   233 RMVVSLRCIECGVRSV-------RRQSRIVGGSTASPGDWPWQVSLHVQGIHVCGGSIITPEWIV 290

  Fly    68 TAAHCLQSVSASVLQVRAGSTYWSSGGVVAK-----------VSSFKNHEGYNANTMVNDIAVIR 121
            |||||::...:|       ..||::...:.|           |....:|..|::.|..||||:::
  Rat   291 TAAHCVEEPLSS-------PRYWTAFAGILKQSLMFYGSRHQVEKVISHPNYDSKTKNNDIALMK 348

  Fly   122 LSSSLSFSSSIKAISLATYNPANGASAA----VSGWG-TQSSGSSSIPSQLQYVNVNIVSQSQCA 181
            |.:.|:|:..:|.:.|.  ||......|    :|||| |...|.:|  ..|....|.::..|:| 
  Rat   349 LQTPLAFNDVVKPVCLP--NPGMMLDLAQECWISGWGATYEKGKTS--DVLNAAMVPLIEPSKC- 408

  Fly   182 SSTYGYGSQIRNTMICAA--ASGKDACQGDSGGPLVS--GGV--LVGVVSWGYGCAYSNYPGVYA 240
            :|.|.|.:.|...||||.  ....|:||||||||||:  ..:  |:|..|||.|||.:..||||.
  Rat   409 NSKYIYNNLITPAMICAGFLQGSVDSCQGDSGGPLVTLKNEIWWLIGDTSWGSGCAKAYRPGVYG 473

  Fly   241 DVAVLRSWV 249
            :|.|...|:
  Rat   474 NVTVFTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 89/240 (37%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 3/13 (23%)
Tryp_SPc 254..485 CDD:238113 89/241 (37%)
Blue background indicates that the domain is not in the aligned region.

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