DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Rhox4b

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_067275.1 Gene:Rhox4b / 57737 MGIID:1930129 Length:205 Species:Mus musculus


Alignment Length:134 Identity:37/134 - (27%)
Similarity:52/134 - (38%) Gaps:32/134 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 EDSPTNTDGGLDVDN----DDELSSSLNNGHDLSDME---------------------RPRKV-- 153
            |..|...|..| :||    |.:.|.|......|.:..                     ||:.|  
Mouse    63 EGGPAAGDADL-MDNSNQEDQDTSGSAQEEEKLPEEPVLRDAVVIDKVQPIPVLVSGVRPKSVWV 126

  Fly   154 --RRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREK--F 214
              |.....|..:||.:|||.|::..:.....|..||..:.:|||||..||:.||..:|:.:.  .
Mouse   127 QQRSLHYNFQWWQLQELERIFQQNHFIRAEERRHLARWIGVSEARVMTWFKKRREHFRRGQSQLG 191

  Fly   215 MNQD 218
            ||.|
Mouse   192 MNDD 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 20/55 (36%)
Rhox4bNP_067275.1 homeodomain 129..187 CDD:238039 21/57 (37%)

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