DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hbn and Rhox2f

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001078825.1 Gene:Rhox2f / 434764 MGIID:3770275 Length:191 Species:Mus musculus


Alignment Length:122 Identity:31/122 - (25%)
Similarity:45/122 - (36%) Gaps:18/122 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 QVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRS------------------ 156
            ||....:||.....|....|.:.|..........:.|:|..::|...                  
Mouse    69 QVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLW 133

  Fly   157 RTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREK 213
            |.:|...||.:||..|:...|........||..:.:|||.||.||..||.|:|..::
Mouse   134 RHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKR 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 20/73 (27%)
Rhox2fNP_001078825.1 homeodomain 134..186 CDD:238039 20/51 (39%)

Return to query results.
Submit another query.