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Protein Alignment hbn and CG4328
DIOPT Version :10
| Sequence 1: | NP_788420.1 |
Gene: | hbn / 47894 |
FlyBaseID: | FBgn0008636 |
Length: | 409 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_648567.2 |
Gene: | CG4328 / 39405 |
FlyBaseID: | FBgn0036274 |
Length: | 544 |
Species: | Drosophila melanogaster |
| Alignment Length: | 105 |
Identity: | 36/105 - (34%) |
| Similarity: | 49/105 - (46%) |
Gaps: | 12/105 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 131 DDELSSSLNNGHDL-SDMERPRKV------RRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAM 188
|.|....:..|:|. .|...|.|: :|.||...|.|....:.:||.:..|....||:||.
Fly 312 DYEKEVEMLQGYDFYGDELFPPKLDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAK 376
Fly 189 RLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQG 228
...||...|||||||:|||.:|.:|...|:. |.:|
Fly 377 DTGLSLRIVQVWFQNQRAKVKKIQKKAKQEP-----PSKG 411
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| hbn | NP_788420.1 |
Homeodomain |
154..210 |
CDD:459649 |
24/55 (44%) |
| CG4328 | NP_648567.2 |
LIM1_Lmx1b |
199..251 |
CDD:188757 |
|
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.