Protein Alignment hbn and gsb

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Alignment Length: 301
• Identity: 81/301 - (26%)
• Similarity: 120/301 - (39%)
• Gaps: 73/301 - (24%)

  Fly   115 REDSPTNTDGGLD---------VDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLER 170
            |..|.:.|...:|         |.::||......     ..::..||.|||||||:..|:..|||
  Fly   143 RGSSGSGTSHSIDGILGGGAGSVGSEDESEDDAE-----PSVQLKRKQRRSRTTFSNDQIDALER 202

  Fly   171 AFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQ---GLPEF 232
            .|.:||||||:|||:||....|:||||||||.||||:.||:   :|..:.....|..   |....
  Fly   203 IFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQ---LNTQQVPSFAPTSTSFGATPT 264

  Fly   233 PLGIPLPPHGLPGHPGSMQSEFWPPHFALHQH---------FNPAAAAAAGLLPQHLMAPHYKLP 288
            ....|.|..|:    ....|:.||...|...|         .:||::.:......|  :|.....
  Fly   265 TSAAPAPNMGM----SLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAH--SPVQTQA 323

  Fly   289 NFHTLLSQYM----GLSNLNGIFGAGA-----------------AAAAAAASAGYPQNLSLH--A 330
            ......|::|    |:.:.|..:.:.|                 .|:|||:.:.:|.....:  |
  Fly   324 QQPGTGSEFMTSTYGVGSSNATYPSAAYSMPQTPATSAEQLRSQFASAAASGSHHPSTWDSYNFA 388

  Fly   331 GLSAMSQVSPPCS----------NSSPRESPKLVPHPTPPH 361
            |     ...||.|          :...::|..:...||.|:
  Fly   389 G-----SFFPPASAAGNHISGYHHQVDQKSSMMTTAPTYPY 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	36/55 (65%)
gsb	NP_523863.1	PAX	19..143	CDD:128645	81/301 (27%)
		Homeodomain	186..242	CDD:459649	36/55 (65%)