Protein Alignment hbn and Rx

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: NP_726006.3
• Gene: Rx / 37367
• FlyBaseID: FBgn0020617
• Length: 904
• Species: Drosophila melanogaster
• Alignment Length: 500
• Identity: 144/500 - (28%)
• Similarity: 204/500 - (40%)
• Gaps: 140/500 - (28%)

  Fly     7 SQHHQHHPIMPPAMRPAP--------VQESPVSRPRAVYSIDQILGNQHQIKRSDTPSEVL---I 60
            :||.::....|....|.|        .|.:||: |..:...::.:.:...::..|..:..|   :
  Fly   345 NQHSKYAKSSPTGAGPPPPPGAYFMESQTAPVA-PSQINYDERSMSSASDLEEDDDDAAKLQLDV 408

  Fly    61 THPHHGHPH----------------HIHHLHSSNSNGSNH---------LSHQQQQQHSQQQHHS 100
            |.|....|.                :...|.:....|.|:         :.||||..|.|||  .
  Fly   409 TSPPTPSPRGQLAAKRKSAGVFCDDNEPKLANGQLPGGNYGIRPRSMEEVHHQQQSHHHQQQ--Q 471

  Fly   101 QQQQQQQQLQVQAKREDSPTNTDGG--------------LDVDNDDELSSSLNNGHDL------- 144
            ||||||||||.|...:....|:..|              |:.|:|..::.|..:..||
  Fly   472 QQQQQQQQLQQQQGFQHDFRNSGNGNPNGNSNSGDHGERLNADSDSLVNGSCASSEDLNQTNSSE 536

  Fly   145 --------SDME------RPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEA 195
                    ||.|      ..:|.||:||||||:|||:|||||||:.||||::||:|||:::|.|.
  Fly   537 QGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEV 601

  Fly   196 RVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEF---PLGIPLPPHGLPGHPGSMQSEFWPP 257
            ||||||||||||||::||..:.        ..||..|   |..:.....|||..|       |
  Fly   602 RVQVWFQNRRAKWRRQEKSESL--------RLGLTHFTQLPHRLGCGASGLPVDP-------W-- 649

  Fly   258 HFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGY 322
                   .:|...:|   ||..|..|....|::   |:..:.|:..|....:.||.....|..|.
  Fly   650 -------LSPPLLSA---LPGFLSHPQTVYPSY---LTPPLSLAPGNLTMSSLAAMGHHHAHNGP 701

  Fly   323 PQNLSLHAGLSAMSQVSPPCSNSSPRESPKLVPHP------------TP------PHATPPAGGN 369
            |..   |.|.....|..||     |...|..||||            :|      ||||  :.|:
  Fly   702 PPP---HVGHGGHGQPQPP-----PPPPPHGVPHPHGSHHVVPLSHLSPHLSRMSPHAT--SLGS 756

  Fly   370 GGGGLLTGGLISTAAQSPNS-----AAGASSNASTPVSVVTKGED 409
            ...|:...|....::..|:|     |..:|.::|:..|:...|.|
  Fly   757 PHHGVTPLGTPLHSSLPPSSTATTVAVSSSQSSSSSASLECSGPD 801

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	42/55 (76%)
Rx	NP_726006.3	Homeodomain	560..616	CDD:459649	42/55 (76%)
		OAR	876..892	CDD:461067