Protein Alignment hbn and Gsc

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Alignment Length: 171
• Identity: 63/171 - (36%)
• Similarity: 75/171 - (43%)
• Gaps: 67/171 - (39%)

  Fly    62 HPH--HGHPHHIH---HLHSSNSNGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTN 121
            |||  ||||||.|   |.|     |.:||||.
  Fly   305 HPHHPHGHPHHPHLGAHHH-----GQHHLSHL--------------------------------- 331

  Fly   122 TDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDL 186
                               ||.    ..|::.||.||.||..||.|||..|:||.||||..||.|
  Fly   332 -------------------GHG----PPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQL 373

  Fly   187 AMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQ 227
            |:::||.|.||:|||:|||||||| :|...|::...|..||
  Fly   374 ALKVDLKEERVEVWFKNRRAKWRK-QKREEQERLRKLQEEQ 413

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	36/55 (65%)
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	36/55 (65%)