DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hbn and Prrx1

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_722543.1 Gene:Prrx1 / 266813 RGDID:628884 Length:245 Species:Rattus norvegicus


Alignment Length:128 Identity:58/128 - (45%)
Similarity:76/128 - (59%) Gaps:8/128 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 DSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVF 181
            :||..|.|.   |...:.:..||     |:.::.||.||:||||.:.||..|||.||:|.|||.|
  Rat    66 ESPGLTSGS---DTPQQDNDQLN-----SEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAF 122

  Fly   182 TREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLP 244
            .|||||.|::|:||||||||||||||:|:.|:.|..:|...||.........:..|:.|...|
  Rat   123 VREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNASLLKSYSGDVTAVEQPIVPRPAP 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 39/55 (71%)
Prrx1NP_722543.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..103 16/44 (36%)
Homeodomain 99..151 CDD:459649 36/51 (71%)
OAR 219..235 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 222..235
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.