DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and LOC1280259

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_061515440.1 Gene:LOC1280259 / 1280259 VectorBaseID:AGAMI1_004826 Length:650 Species:Anopheles gambiae


Alignment Length:435 Identity:119/435 - (27%)
Similarity:160/435 - (36%) Gaps:133/435 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TTTTSQHHQHHPIMPPAMRPAPVQESPVSRPRAVYSIDQILGNQHQIKRSDTPSEVLITHPHHGH 67
            |....|.|.:.|.....:||.|..|                    .:|:|   .:::..|.:.|.
Mosquito   286 TGPPKQAHGYDPAGLQVVRPKPASE--------------------LLKQS---VDLINNHHYSGV 327

  Fly    68 PHHI-HHLHSSNSNGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDS---------PTNT 122
            ...| ...||:...|::..|..:.:..:.:|.....:|..........|.||         ||..
Mosquito   328 VGSIGGGTHSTTVPGTDGESDTEARIPAPRQQSLSPEQDDPSSSADGTRSDSAPPPPPTAPPTAE 392

  Fly   123 DGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLA 187
            |   .:.:..|.::.:.|||.........|.|||||.||..||::|||.||:|.|||.|.||:|:
Mosquito   393 D---RLKHPPESTAHVANGHGPLSALSNNKQRRSRTNFTLEQLNELERLFEETHYPDAFMREELS 454

  Fly   188 MRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPP------------ 240
            .||.||||||||||||||||.||.|   ||...|.:|.... |  |:..||.|            
Mosquito   455 QRLGLSEARVQVWFQNRRAKCRKHE---NQMHKGIILSSHS-P--PVTTPLEPCRIAPYVNVPSL 513

  Fly   241 ----HGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLS 301
                .|:|  |||                   ...|:||.|..                     |
Mosquito   514 RAGTGGVP--PGS-------------------GTGASGLPPSS---------------------S 536

  Fly   302 NLNGIFGAGAAAAAAAASAGYPQNLSLHAGL-------------SAMSQVSPPCSNSSPRESPKL 353
            .......|.||||||||:..:|..::..:..             :|:|..|.|.|..|   ..:.
Mosquito   537 TTAAAAAAAAAAAAAAAAVNHPFPVAAFSAFDSAFISAAAQQYAAALSSGSVPTSLFS---LSQY 598

  Fly   354 VPHPTPPHATPPAGGNGGGGLLTGGLISTAAQSPNSAAGASSNAS 398
            ||.|              |||.....|:|.   |..:.....|:|
Mosquito   599 VPRP--------------GGLAAAAAIATL---PGFSVAHDKNSS 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 40/55 (73%)
LOC1280259XP_061515440.1 None

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