DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Arx

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_031518.2 Gene:Arx / 11878 MGIID:1097716 Length:564 Species:Mus musculus


Alignment Length:493 Identity:134/493 - (27%)
Similarity:190/493 - (38%) Gaps:152/493 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TTTTSQHHQHHPIMPPAMRPAPVQES--PVSRPRAVYSIDQI---LGNQHQIKRSDT-------- 54
            |.|.....:..|..|||.||...|:|  .|:...|..:.|.:   ...|..|.||.:        
Mouse   117 TGTAGPRGEVPPPPPPAARPGERQDSAGAVAAAAAAAAWDTLKISQAPQVSISRSKSYRENGAPF 181

  Fly    55 --PSEVL--------ITHPHHGHPHHIHHLHSSNSNGS--------------NHLSHQQQQQHSQ 95
              |...|        :.||.       ..|.:::..||              ..|...::.:..:
Mouse   182 VPPPPALDELSGPGGVAHPE-------ERLSAASGPGSAPAAGGGTGAEDDEEELLEDEEDEEEE 239

  Fly    96 QQHHSQQQQQQQQLQVQAKRED--------------------SPTNTDGG------------LDV 128
            ::......::..:...:|..::                    :...|:||            .|.
Mouse   240 EELLEDDDEELLEDDARALLKEPRRCSVATTGTVAAAAAAAAAAVATEGGELSPKEELLLHPEDA 304

  Fly   129 D-NDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 192
            : .|.|.|..|:.|.|..:....||.||.|||||::||.:|||||:||.||||||||:|||||||
Mouse   305 EGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 369

  Fly   193 SEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLPGHPGS--MQSEFW 255
            :||||||||||||||||||||             .|....|.|:|.|......||.|  :.:..:
Mouse   370 TEARVQVWFQNRRAKWRKREK-------------AGAQTHPPGLPFPGPLSATHPLSPYLDASPF 421

  Fly   256 PPHF-ALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAAS 319
            |||. ||...:..||||||...|.....|                             .:|:...
Mouse   422 PPHHPALDSAWTAAAAAAAAAFPSLPPPP-----------------------------GSASLPP 457

  Fly   320 AGYPQNLSLHAGLSAMSQ---VSP----------PCSNSSPRESPKLVPHPTPPHATPPAGGNGG 371
            :|.|..||...|.:....   :||          |.:::|  .:..|:..|||            
Mouse   458 SGAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSAS--TAAALLRQPTP------------ 508

  Fly   372 GGLLTGGLISTAAQSPNSAAGASSNASTPVSVVTKGED 409
              .:.|.:.|.|...|.:|| |...||:..::..|.::
Mouse   509 --AVEGAVASGALADPATAA-ADRRASSIAALRLKAKE 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 46/55 (84%)
ArxNP_031518.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..264 26/153 (17%)
Homeodomain 331..387 CDD:459649 46/55 (84%)
OAR 528..546 CDD:461067 3/16 (19%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 532..545 2/12 (17%)
Blue background indicates that the domain is not in the aligned region.

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