DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Phox2a

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_032913.1 Gene:Phox2a / 11859 MGIID:106633 Length:280 Species:Mus musculus


Alignment Length:286 Identity:81/286 - (28%)
Similarity:102/286 - (35%) Gaps:133/286 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWR 209
            |.:...||.||.|||||:.||.:|||.|.:|.|||::|||:||:::||:||||||||||||||:|
Mouse    82 SGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146

  Fly   210 KREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAG 274
            |:|:                                                       ||:|.|
Mouse   147 KQER-------------------------------------------------------AASAKG 156

  Fly   275 LLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGYPQNLSLHAGLSAMSQVS 339
                                                 ||.|..|..| ....|.....|..|..|
Mouse   157 -------------------------------------AAGATGAKKG-EARCSSEDDDSKESTCS 183

  Fly   340 P-PCSNSS-------PRESPKLVPHPTP------PHATPPAG-------GNGGGGLLTG------ 377
            | |.|.:|       ...||:|.|.|.|      |...|..|       |.||||..||      
Mouse   184 PTPDSTASLPPPPAPSLASPRLSPSPLPAALGSGPGPQPLKGALWAGVAGGGGGGPGTGAAELLK 248

  Fly   378 -------------GLISTAAQSPNSA 390
                         |::|:..:.|..|
Mouse   249 AWQPAEPGPGPFSGVLSSFHRKPGPA 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 38/55 (69%)
Phox2aNP_032913.1 Homeodomain 91..147 CDD:459649 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..244 36/191 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..280 4/15 (27%)

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