DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and drgx

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_004915967.1 Gene:drgx / 100493837 XenbaseID:XB-GENE-993712 Length:263 Species:Xenopus tropicalis


Alignment Length:278 Identity:87/278 - (31%)
Similarity:112/278 - (40%) Gaps:63/278 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 ELSSSLNNGHDLSDME---RPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSE 194
            |:.|.....|..|:.:   ..||.||:|||||..||..||..|.:|.||||||||:|||:::|:|
 Frog    11 EVGSPPFGAHAASEFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTE 75

  Fly   195 ARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLPGHPGSMQSEFWPPHF 259
            ||||||||||||||||.|:                                  ||.:.|      
 Frog    76 ARVQVWFQNRRAKWRKTER----------------------------------GSCEQE------ 100

  Fly   260 ALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGI-----FGAGAAAAAAAAS 319
            ...:.......|...|.|...:.|  ......||.:|...||:...:     |.......|...:
 Frog   101 GAKESAPEVTTAGRNLSPSSTVEP--VRGKKETLEAQQRCLSHDRAVGSATSFFPSCLPGALLNT 163

  Fly   320 AGYPQNLSLHAGLSAMSQVSPPCS--NSSPRESPKLVPHPTPPHATP-------PAGGNGGGGLL 375
            |.|.|.||..|.|..    ||.||  .|.|.....|.|:....|.|.       .|..:....|.
 Frog   164 ASYAQALSHVASLKG----SPLCSCCVSDPLGLSFLPPYGCQSHRTASVAALRMKAREHSEAVLQ 224

  Fly   376 TGGLISTAAQSPNSAAGA 393
            :..|:.:|..|..::|.|
 Frog   225 SAQLLPSAGNSTGASASA 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 40/55 (73%)
drgxXP_004915967.1 Homeodomain 35..91 CDD:459649 40/55 (73%)
OAR 204..220 CDD:461067 2/15 (13%)

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