DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and LOC5667563

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_001688391.3 Gene:LOC5667563 / 5667563 VectorBaseID:AGAMI1_004577 Length:456 Species:Anopheles gambiae


Alignment Length:428 Identity:101/428 - (23%)
Similarity:163/428 - (38%) Gaps:126/428 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 SPAQTPTGP--SAQQQQHLTSP------------HHQQLPQQQTPNS--VASGASSNLQQQQQQQ 191
            |.::.|.||  :|.:...:..|            |.::..::.|.|:  .|:|:|..::.:....
Mosquito    18 SSSEPPPGPGSTACEPPIVNRPLSPRKFFERLYGHLERDDKRATNNNNGSANGSSDEVRDRNVHV 82

  Fly   192 NAAVAPGQTQIVAPT---------TASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTS 247
            ....|.....::..|         ::|.|..|||     :|.||....   |........|.|:|
Mosquito    83 TVTKASDPCALIDETHRYHHHDHNSSSNSQKSVS-----VNSSISSGS---PRSSLAVDIEEDSS 139

  Fly   248 AAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAY 312
            ...       :....|...  |.|.:.|:.. |||      |:     .:|....::|.|.|:.|
Mosquito   140 QDA-------SIGSPGLQP--GGGDHPRQPP-AYP------PL-----RHYGITSSSSTACASEY 183

  Fly   313 M------NEAERHVSAAARQSVEGTSTSSYEP---PTYSSP------GGLRGYP-------SENY 355
            .      .:....::...:||    |::...|   |..:.|      |||:..|       |..:
Mosquito   184 PVPTTIGGQCYGFLAVTPQQS----SSAGVLPVPAPHLTQPGDPALVGGLQHRPQHGSMAVSTFF 244

  Fly   356 SSSGASGGLSVGAVGPCTPNP-------------GLHEWTG-----QVSVRKKRKPYSKFQTLEL 402
            ||:|.:||   |..||.:..|             ||..:..     :...|::|..:|..|||.|
Mosquito   245 SSTGGAGG---GGYGPPSFRPFFGIAHDGPQLPAGLSAFLARRRKKEGRPRRQRTTFSSEQTLRL 306

  Fly   403 EKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQ-------------- 453
            |.||..|.|:|:.:|:|||..|:|:|.|:||||||||.|:|:..:.|.:||              
Mosquito   307 EVEFHRNEYISRGRRFELAEVLKLSETQIKIWFQNRRAKDKRIEKAQIDQQYRTFAAVNGLLTPF 371

  Fly   454 -----------NNNNNSSSNHNHAQATQQHHSGHHLNL 480
                       ::.:....:|.|.||.:......|..|
Mosquito   372 SPQYPAALIATHHQHQQHPSHLHEQAQEPQQQFQHQQL 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 30/55 (55%)
LOC5667563XP_001688391.3 None

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