Protein Alignment Abd-B and Emx1

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001414509.1
• Gene: Emx1 / 500235
• RGDID: 1564002
• Length: 290
• Species: Rattus norvegicus
• Alignment Length: 352
• Identity: 75/352 - (21%)
• Similarity: 126/352 - (35%)
• Gaps: 104/352 - (29%)

  Fly   161 SPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMS 225
            :|.|:..|:...|:|  |.|::.:.|...::...:   ::.:........||.|..:....:.::
  Rat    13 APGHRAFPRAPLPHS--SSAAATMFQPATKRGFTI---ESLVAKDGGTGGSPGSGGAGSHPLAVA 72

  Fly   226 IQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYP---ETQ 287
            ....||...|:.                                           ||:|   ||.
  Rat    73 ASEEPLRPTALN-------------------------------------------YPHPSAAETA 94

  Fly   288 FPVGQYWGPNYRPDQTTSAAAAAAYMN----------EAERHVSAAARQSVEGTSTSSYEPP--- 339
            |..|           ..:||||.|..:          ||..|.:.....:.: ..:||.:||
  Rat    95 FVSG-----------FPAAAAAGASRSLYGGPELVFPEAMNHPALTVHPAHQ-LGSSSLQPPHSF 147

  Fly   340 ---TYSSPGGLRGYP--------SENYSSSGA-SGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRK 392
               .:..|  |..||        ...:.:|.. ..||.:.  ||....|           ::.|.
  Rat   148 FSAQHRDP--LHFYPWVLRNRFFGHRFQASEVPQDGLLLH--GPFARKP-----------KRIRT 197

  Fly   393 PYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQNNNN 457
            .:|..|.|.||:.|..|.||...:|.:||.:|.|:|.|||:||||||.|.|:....:...::...
  Rat   198 AFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQK 262

  Fly   458 NSSSNH-NHAQATQQHHSGHHLNLSLN 483
            ...|:| |..:...:..:|..::::.|
  Rat   263 KKGSHHINRWRIATKQANGEDIDVTSN 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	26/55 (47%)
Emx1	NP_001414509.1	None