Protein Alignment Abd-B and Hoxb4

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001094257.1
• Gene: Hoxb4 / 497988
• RGDID: 1560113
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 249
• Identity: 68/249 - (27%)
• Similarity: 100/249 - (40%)
• Gaps: 73/249 - (29%)

  Fly   220 EDINMSIQLAPLHIPAIRAG-----PGFETDTS------AAVKRHTAHWAYNDEGFNQHYGSGYY 273
            |:.:.|..|...|.|...||     .||:.:.:      ..|:|:.   |..|.|
  Rat    21 EEYSQSDYLPSDHSPGYYAGGQRRESGFQPEAAFGRRAPCTVQRYA---ACRDPG---------- 72

  Fly   274 DRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEP 338
                  ..|.|....|...   |...|.....:.|.|......:|.         |..|:|...|
  Rat    73 ------PPPPPPPPPPPPP---PGLSPRAPVQSTAGALLPEPGQRS---------EVVSSSPPPP 119

  Fly   339 PTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSV------------RKKR 391
            |...:|    .:||.::|:              | ..|.::.|..:|.|            ::.|
  Rat   120 PCAQNP----LHPSPSHSA--------------C-KEPVVYPWMRKVHVSTVNPNYAGGEPKRSR 165

  Fly   392 KPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKN 445
            ..|::.|.|||||||.:|.|:::::|.|:|..|.|:|||:||||||||||.||:
  Rat   166 TAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	30/55 (55%)
Hoxb4	NP_001094257.1	Homeodomain	162..218	CDD:459649	30/55 (55%)