Protein Alignment Abd-B and Hoxb5

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001178854.1
• Gene: Hoxb5 / 497987
• RGDID: 1562292
• Length: 269
• Species: Rattus norvegicus
• Alignment Length: 228
• Identity: 67/228 - (29%)
• Similarity: 101/228 - (44%)
• Gaps: 47/228 - (20%)

  Fly   253 HTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAA---------- 307
            ||..:.||..|.:...........|..|.......||.... .|.:|  |.||:.
  Rat    41 HTGSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPASAQ-EPRFR--QATSSCSLSSPESLPC 102

  Fly   308 ----------AAAAYMNEAERHVSAAARQSVEGTSTSSYEP----PTYSSPGGLRGYPSENYSSS 358
                      :|::..::|....|:|....::..|.|| ||    ...|||...|..|....:|:
  Rat   103 TNGDSHGAKPSASSPSDQATPASSSANFTEIDEASASS-EPEEAASQLSSPSLARAQPEPMATST 166

  Fly   359 GASGGLSVGAVGPCTPNPGLHEWTGQVSV---------RKKRKPYSKFQTLELEKEFLFNAYVSK 414
            .|..|          ..|.:..|..::.:         ::.|..|:::|||||||||.||.|:::
  Rat   167 AAPEG----------QTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTR 221

  Fly   415 QKRWELARNLQLTERQVKIWFQNRRMKNKKNSQ 447
            ::|.|:|..|.|:|||:||||||||||.||:::
  Rat   222 RRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	32/55 (58%)
Hoxb5	NP_001178854.1	PRK07003	<67..>171	CDD:235906	24/107 (22%)
		Homeodomain	195..251	CDD:459649	32/55 (58%)