Protein Alignment Abd-B and bcd

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 322
• Identity: 56/322 - (17%)
• Similarity: 88/322 - (27%)
• Gaps: 153/322 - (47%)

  Fly   273 YDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYE 337
            :...|..::|:|..|.|..|.
  Fly    25 HSHPHPHSHPHPHHQHPQLQL-------------------------------------------- 45

  Fly   338 PPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPN----PGL---HEWTGQVSVRKKRKPYS 395
            ||.:.:|..|        .....:|.::...:.|..||    |.:   .|....:.:|:.|:..:
  Fly    46 PPQFRNPFDL--------LFDERTGAINYNYIRPYLPNQMPKPDVFPSEELPDSLVMRRPRRTRT 102

  Fly   396 KF---QTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQ---- 453
            .|   |..|||:.||...|::..:..:|:..|.|...||||||:|||.::|..|.:..:|.
  Fly   103 TFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGM 167

  Fly   454 ---------------------------------------------------NNNNNSSSNHNHAQ 467
                                                               |...|.:..|||||
  Fly   168 PLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEHYSESFNAYYNYNGGHNHAQ 232

  Fly   468 AT------------------------------------QQHHSGHHLNLSLNMGHHAAKMHQ 493
            |.                                    |.||.|:|:...:......|:..|
  Fly   233 ANRHMHMQYPSGGGPGPGSTNVNGGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQAQQQQ 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	22/58 (38%)
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	19/46 (41%)