Protein Alignment Abd-B and Rx

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_726006.3
• Gene: Rx / 37367
• FlyBaseID: FBgn0020617
• Length: 904
• Species: Drosophila melanogaster
• Alignment Length: 565
• Identity: 110/565 - (19%)
• Similarity: 171/565 - (30%)
• Gaps: 183/565 - (32%)

  Fly    11 QQQQQQEQQHLQEQQQHLQQLHH--HAHHHLPQPLHTTSHHHS-----------------AHPHL 56
            ||.|......|...||...|..|  ||.|.     |.|.|.|:                 .||.
  Fly   230 QQPQVPNATPLHHGQQMGGQAGHATHAGHG-----HPTHHGHAPFGYHNAFGFGQGGHGYGHPE- 288

  Fly    57 QQQQQQQQHAVVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPL----VAVQQQHLPAPQ 117
                         .:..:.|....|........|..:..   :|||.||    ....||||.|
  Fly   289 -------------EAAGNYLNSMHQMVEANQLQTGANGA---NPPPAPLPPSSFGSHQQHLAA-- 335

  Fly   118 QQQQLQQQQQQQQQQLATTPVAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASS 182
            ...|.|:||.|..:...::|..     |..|..|.|...:..|:|   ..|.|...:..:..::|
  Fly   336 LAAQAQEQQNQHSKYAKSSPTG-----AGPPPPPGAYFMESQTAP---VAPSQINYDERSMSSAS 392

  Fly   183 NLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTS 247
            :|::....    .|..|..:.:|.|                          |:.|.        .
  Fly   393 DLEEDDDD----AAKLQLDVTSPPT--------------------------PSPRG--------Q 419

  Fly   248 AAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNY--RPDQTTSAAAAA 310
            .|.||.:|....:|.                      |.:...||..|.||  ||     .:...
  Fly   420 LAAKRKSAGVFCDDN----------------------EPKLANGQLPGGNYGIRP-----RSMEE 457

  Fly   311 AYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGA----VGP 371
            .:..:...|.....:|..:.......:...:.......|.|:.|.:|......|:..:    .|.
  Fly   458 VHHQQQSHHHQQQQQQQQQQQQLQQQQGFQHDFRNSGNGNPNGNSNSGDHGERLNADSDSLVNGS 522

  Fly   372 CTPNPGLHEWT---------------GQ------VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQ 415
            |..:..|::..               ||      ...|:.|..::.:|..|||:.|..:.|....
  Fly   523 CASSEDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVY 587

  Fly   416 KRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQNNNNNSSSNH----------------- 463
            .|.|||..:.|.|.:|::||||||.|.::..:.::.:....:.:...|
  Fly   588 SREELAMKVNLPEVRVQVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPWLSP 652

  Fly   464 ----------NHAQATQQHHSGHHL-----NLSLN----MGHHAA 489
                      :|.|.....:....|     ||:::    ||||.|
  Fly   653 PLLSALPGFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHA 697

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	22/55 (40%)
Rx	NP_726006.3	Homeodomain	560..616	CDD:459649	22/55 (40%)
		OAR	876..892	CDD:461067