DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and ceh-19

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001023142.1 Gene:ceh-19 / 177590 WormBaseID:WBGene00000442 Length:199 Species:Caenorhabditis elegans


Alignment Length:68 Identity:34/68 - (50%)
Similarity:42/68 - (61%) Gaps:3/68 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK---NS 446
            |..||.|:.||..|...||.||..:.|:|..||.:|::.|.|||.|:|.||||||.|.||   :|
 Worm    92 VCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWKKQLTSS 156

  Fly   447 QRQ 449
            .||
 Worm   157 IRQ 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 28/55 (51%)
ceh-19NP_001023142.1 Homeodomain 95..151 CDD:459649 28/55 (51%)

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