Protein Alignment Abd-B and Hoxa2

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_036713.2
• Gene: Hoxa2 / 103690123
• RGDID: 11468112
• Length: 372
• Species: Rattus norvegicus
• Alignment Length: 171
• Identity: 53/171 - (30%)
• Similarity: 74/171 - (43%)
• Gaps: 50/171 - (29%)

  Fly   331 TSTSSYE---PPTYS------SPGGLRGYPSENYSSSGASGGLSVGAVGPCTP----NPGLHEWT 382
            |||.|:.   ||.:.      :||   .:|.::..:.|.......|:.|...|    .|..:.|.
  Rat    39 TSTLSHSTLIPPPFEQTIPSLNPG---SHPRQSAGAGGRPKSSPAGSRGSPVPARALQPPEYPWM 100

  Fly   383 GQVSVRKK----------------------------------RKPYSKFQTLELEKEFLFNAYVS 413
            .:....||                                  |..|:..|.|||||||.||.|:.
  Rat   101 KEKKAAKKTALPPAAASTGPACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLC 165

  Fly   414 KQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQN 454
            :.:|.|:|..|.|||||||:||||||||:|:.:|.:.||.:
  Rat   166 RPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNS 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	34/89 (38%)
Hoxa2	NP_036713.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	42..96		11/56 (20%)
		Antp-type hexapeptide	96..101		1/4 (25%)
		Homeodomain	140..196	CDD:459649	32/55 (58%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	194..225		4/13 (31%)