Protein Alignment Abd-B and nkx1-1

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: XP_002936812.1
• Gene: nkx1-1 / 100493120
• XenbaseID: XB-GENE-488879
• Length: 408
• Species: Xenopus tropicalis
• Alignment Length: 396
• Identity: 84/396 - (21%)
• Similarity: 132/396 - (33%)
• Gaps: 81/396 - (20%)

  Fly   137 PVAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAP---G 198
            |:.||.:.............:.:.|...|:|.....|   |.|...:.|......||...|   |
 Frog    13 PIGGAQAAGVVEAVTCGLHGEMMDSHGEQRLTASDLP---AYGCPRDRQGDHPNCNAPAGPESLG 74

  Fly   199 QTQIVAPTTASVS------PSSVSSQKEDINMSIQLAPLHIPAIRA-----GPGFETDTSA---- 248
            ...:....|.|.|      |:..:|::...:.:.:....:|  :|.     ||...|...|
 Frog    75 AAPLAVHRTTSFSVLDILDPNKFNSKQRHCSGAYKPPGDYI--LRGEEKAEGPDIATGQKAFLEE 137

  Fly   249 --AVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAA 311
              :.|:.|.  ...:||..||..:.....:.....|..:.:....:........::::::..:..
 Frog   138 YESCKKSTE--VIKEEGLYQHSATEDCQTQEFSPSPGSDLEEEEDEEEDEEICSEESSNSTPSGL 200

  Fly   312 YMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGG-------LRGYPSENYSSSGASGGLSVGAV 369
                |||...|...|..:..:|.:........|.|       ..|.|....:.|.:..|
 Frog   201 ----AERDPGAGNGQGEDALNTGAPAGSNQQQPTGKNQQQQNQHGKPKRKRTGSDSKSG------ 255

  Fly   370 GPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIW 434
                            ..|:.|..::..|.:.||.:|....|:|..:|..||.:|.|||.|||||
 Frog   256 ----------------KPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQVKIW 304

  Fly   435 FQNRRMKNKKNSQRQANQQNNNNNSS-----SNHNHAQA--------TQQHHSGHHLNLSLNMGH 486
            |||||.|.||        ||...::|     |.|....:        :...||....|.....||
 Frog   305 FQNRRTKWKK--------QNPGADTSAPTGGSGHGGGGSGSVLGGGLSPLSHSPPMGNPMALHGH 361

  Fly   487 HAAKMH 492
            |....|
 Frog   362 HGYPSH 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	26/55 (47%)
nkx1-1	XP_002936812.1	Homeodomain	258..314	CDD:459649	26/55 (47%)