Protein Alignment Abd-B and hoxd12a

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001119958.1
• Gene: hoxd12a / 100006598
• ZFINID: ZDB-GENE-990415-118
• Length: 277
• Species: Danio rerio
• Alignment Length: 238
• Identity: 69/238 - (28%)
• Similarity: 98/238 - (41%)
• Gaps: 71/238 - (29%)

  Fly   273 YDRKHMFAYPYPETQFPVGQYWGPNY----RPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTST 333
            |.|:.:.:.|:..:...........|    :|..:.|||.:|:.....:..:..:.|...:..|.
Zfish    44 YSRREVCSLPWSSSNSCTAPAQSRAYSGYSQPFFSNSAAVSASLNTHKKGSLEESGRYYFQDVSH 108

  Fly   334 SSYEPPTYSSPGGLRGYPSENYSS--SGASGGLS------VGAVGP----CTPNP---------- 376
            .|.||          |.|:..|:|  |.||.|||      :.||.|    |...|
Zfish   109 KSEEP----------GRPNAAYASEQSSASNGLSNLERRQLNAVAPNELSCIEQPESDASKQSVS 163

  Fly   377 -----------------------------------GLHEWTGQVSVRKKRKPYSKFQTLELEKEF 406
                                               ||.....||..|||||||:|.|..|||.||
Zfish   164 SIAPFQPSLSAQNIRPAFTDGTLNFSNDPSAIDTNGLPWCPSQVRSRKKRKPYTKPQLTELENEF 228

  Fly   407 LFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQ 449
            :.|.::::|||.||:..|:|:::||||||||||||.|:...|:
Zfish   229 MMNEFINRQKRKELSDRLELSDQQVKIWFQNRRMKKKRLMMRE 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	34/55 (62%)
hoxd12a	NP_001119958.1	Homeodomain	210..266	CDD:459649	34/55 (62%)