DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hinfp and CG6254

DIOPT Version :10

Sequence 1:NP_652054.1 Gene:Hinfp / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster


Alignment Length:317 Identity:77/317 - (24%)
Similarity:123/317 - (38%) Gaps:59/317 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 DCEREFVSIVEFQDHIVK-HALFEYDIQKTPEDERPKTMCNWAMCHKHMGNKYRLIEHISTHSNK 202
            |..||.|:  :.:|.|.: .|:::.:|.|.|. ::||..      .:||..     .|.:...:.
  Fly   309 DISREHVT--DEEDEISEVPAMYKCNICKKPY-KKPKAY------KRHMEE-----VHNTVADDL 359

  Fly   203 KQVACFHCGELFRTKTTLF----DHLRRQPENNTNSFQCAQCFKFFATKKLLKSHVV---RHVNC 260
            .|:.|..|...|.|...|.    .|:|.:|:.:.   .|..|.|.|.|...||.|:.   ..:..
  Fly   360 PQLECNQCKLCFPTVAQLHAHHRTHVRAKPKTDN---CCPHCEKRFTTSGTLKRHIEGIHNQIKP 421

  Fly   261 YKCTMCDMTCSSASSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHPDC 325
            |.|.:|..:.:..:.|..| :..|..:.|.:|..|.......:.|..|:. .||..:::|  ..|
  Fly   422 YVCDLCGKSFNYITGLKDH-KLVHTDECPFECPVCKRGFKNNARLKIHLD-THSAEIYEC--TVC 482

  Fly   326 HYSVRTYTQMRRHFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKHGFR----------LPSG 380
            ...::|.....:|.| ||.:.. .:.|..|...||..|:|.|||:...|.|          ..:|
  Fly   483 GLKLKTRRTFNKHKL-VHSDTR-QFKCEVCGSAFKRSKTLKAHLILHTGIRPYKCNFCGRDFANG 545

  Fly   381 -----HKRFTYRVDENGFYRLETTRLESLEVTQQILSPQVND-----SLAKPGTGSC 427
                 |||..        :..|....|:..||:..|.|.:::     .|.|...|.|
  Fly   546 SNCRSHKRQA--------HPKELAEEEARGVTRSTLLPMLDELTIASKLLKTPAGPC 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HinfpNP_652054.1 C2H2 Zn finger 182..199 CDD:275368 3/16 (19%)
C2H2 Zn finger 207..225 CDD:275368 6/21 (29%)
C2H2 Zn finger 237..257 CDD:275368 8/22 (36%)
C2H2 Zn finger 263..284 CDD:275368 4/20 (20%)
C2H2 Zn finger 292..311 CDD:275368 4/18 (22%)
C2H2 Zn finger 352..373 CDD:275368 9/20 (45%)
CG6254NP_649983.2 zf-AD 21..99 CDD:462262
COG5048 <353..554 CDD:227381 51/209 (24%)
C2H2 Zn finger 364..384 CDD:275368 5/19 (26%)
C2H2 Zn finger 395..416 CDD:275368 8/20 (40%)
C2H2 Zn finger 424..444 CDD:275368 4/20 (20%)
C2H2 Zn finger 452..472 CDD:275368 4/20 (20%)
C2H2 Zn finger 479..499 CDD:275368 5/22 (23%)
C2H2 Zn finger 507..527 CDD:275368 9/19 (47%)
C2H2 Zn finger 535..553 CDD:275368 2/17 (12%)
Blue background indicates that the domain is not in the aligned region.

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