DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hinfp and CG4707

DIOPT Version :10

Sequence 1:NP_652054.1 Gene:Hinfp / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster


Alignment Length:466 Identity:97/466 - (20%)
Similarity:166/466 - (35%) Gaps:126/466 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RPQSSVPAPQPPGKRKKPAELELTCGWRDCQEICTGEWSLNGHIGDHLEHYAK----AQDDRGAH 63
            ||..:.|...|..|::..:|        |.:|        |....:.:|..|.    ..||    
  Fly   209 RPPKAKPESAPSPKKELDSE--------DGEE--------NARDNNDMEFVAPEAVLGTDD---- 253

  Fly    64 AEHTEHQCTWNSCDFRTENQVEFERHSYYHGYYLNLLLQGKLECDLHPEIPACTAPARLMEK--- 125
                       |....:|:..|...||.               .|:.||......|.|::.|   
  Fly   254 -----------SSSSSSESSGEDSDHSL---------------PDIEPEERYAEIPKRVVVKPKK 292

  Fly   126 --------LPALGQNFRCGWTDCEREFVSIVEFQDHIVKHALFEYDIQKTPEDERPKTMC----- 177
                    :|.:    |....:.||..:...|:.:.|::  .|:         :.|.::|     
  Fly   293 YRKREKPLVPPV----RLSREEIERRKLQQDEYDEIILQ--FFK---------KFPCSLCNLLVQ 342

  Fly   178 NWAMCHKHM--------------GNKYR----LIEHISTHSNKKQVACFHCGELFRTKTTLFDH- 223
            |:|...:|.              |.|:.    |.||:..|.|.....|..||.:|:....|..| 
  Fly   343 NFADMRRHQRVSHNIESGYIECCGRKFHLRKALAEHVLVHKNPDHFMCSQCGRVFQDSRALEVHE 407

  Fly   224 -------LRRQPENNTNSFQCAQCFKFFATKKLLKSH-VVRHVN----CYKCTMCDMTCSSASSL 276
                   ::.:|:.. ..:||.:|.|.|.||..::.| |.:||.    .|.|..|:....:...|
  Fly   408 QTHTNPEVKAEPKEK-RIYQCEKCPKSFTTKAAMEYHDVSKHVPKSEFKYSCPECNKKIPTERKL 471

  Fly   277 TTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVH------QCEHPDCHYSVRTYTQM 335
            ..|:||.|..:..:.|.:|......:::|.||.::.||:...      |||  .|...:|..:.:
  Fly   472 KEHLRYMHDPEAAIICDKCGKTLRSQTNLKKHHELEHSEKPRPKPDPVQCE--ICGTWLRHLSGL 534

  Fly   336 RRHFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKHGFRLPSGHKRFTYRVDENGFYRLETTR 400
            ::|...||......:.||.|.:...:.::|..|:...|     ...::|...:.|..|.|.:..|
  Fly   535 KQHMKTVHEPPGDEHRCHICNKTSTNSRALKRHIYHNH-----LCERKFKCGMCEKAFKRPQDLR 594

  Fly   401 LESLEVTQQIL 411
            ..:...|.::|
  Fly   595 EHTSTHTGEVL 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HinfpNP_652054.1 C2H2 Zn finger 182..199 CDD:275368 6/34 (18%)
C2H2 Zn finger 207..225 CDD:275368 6/25 (24%)
C2H2 Zn finger 237..257 CDD:275368 8/20 (40%)
C2H2 Zn finger 263..284 CDD:275368 6/20 (30%)
C2H2 Zn finger 292..311 CDD:275368 5/18 (28%)
C2H2 Zn finger 352..373 CDD:275368 5/20 (25%)
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368 4/20 (20%)
LIM <361..407 CDD:413332 12/45 (27%)
C2H2 Zn finger 365..382 CDD:275368 5/16 (31%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 427..443 CDD:275368 6/15 (40%)
COG5236 <455..>574 CDD:227561 29/125 (23%)
C2H2 Zn finger 458..476 CDD:275368 4/17 (24%)
C2H2 Zn finger 487..507 CDD:275368 5/19 (26%)
C2H2 Zn finger 521..540 CDD:275368 5/20 (25%)
C2H2 Zn finger 551..572 CDD:275368 5/20 (25%)
C2H2 Zn finger 580..600 CDD:275368 4/19 (21%)
C2H2 Zn finger 608..629 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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