DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hinfp and CG8388

DIOPT Version :10

Sequence 1:NP_652054.1 Gene:Hinfp / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster


Alignment Length:374 Identity:87/374 - (23%)
Similarity:139/374 - (37%) Gaps:85/374 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KAQDDRGAHAEHTEHQCTWNSCDFRTENQVEF----ERHSYYHGYYL----NLLLQGKLECDLH- 110
            |:|:......||.:.||  :.|:...|:..|.    .|.....||.:    ..|.:|.|...|. 
  Fly   218 KSQEFNDYIREHYKVQC--HICNLPMEDFSEMLAHVRREHKQRGYAMCCNRKFLKRGVLVDHLRR 280

  Fly   111 ---PEIPACTAPARL------------MEKLPALGQNFRCGWTDCEREFVSIVEFQDHIVKHALF 160
               ||...|:...|:            |.::.:.|:.:||  ..|.:.|.|.|.::.|.:.|   
  Fly   281 HQDPETFKCSICGRVMGHRRSLELHMRMHEIKSRGRLYRC--EQCSKAFYSAVVYERHKLTH--- 340

  Fly   161 EYDIQKTPEDERPKTMCNWAMCHKHMGNKYRLIEHIS-THSNKKQVACFHCGELFRTKTTLFDHL 224
                  .|. |:.|..|  ..|.|...::|.:.:|:. .|.|.....|..||:..|.:..|..|:
  Fly   341 ------IPR-EQWKVPC--THCEKTYPSQYTMQQHVKLVHLNLYAKICDVCGKSIRGREALARHM 396

  Fly   225 RRQPENNTNSFQCAQCFKFFATKKLLKSHVVRHVNCYKCTMCDMTCSSASSLTTHIRYRHLKD-- 287
                |.:|...|.|                      .||.:||...::...|..||:..|..:  
  Fly   397 ----EEHTGGPQAA----------------------IKCHLCDSMLTTKYGLARHIKMMHTAENL 435

  Fly   288 KPLKCSECDTRCVRESDLAKHVQIVHSKT-VHQCEHPDCHYSVRTYTQMRRHFLEVHGNNPILYA 351
            :|::|..|...|........|::..|:.. .|||  |.|..:.:...:::.|.....|.  :||.
  Fly   436 QPMQCEFCLKICPSLQAHQHHIKYTHNTARSHQC--PMCEKAFKRPNELKEHMTTHTGE--VLYT 496

  Fly   352 CHCCERFFKSGKSLSAHLMKKHGFRLPSGHKRFTYRVDENGFYRLETTR 400
            |..|.:.|.|..::.||..|.|       .|.:    :||...||..:|
  Fly   497 CPHCPQTFNSNANMHAHRKKVH-------RKEW----EENRHKRLNRSR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HinfpNP_652054.1 C2H2 Zn finger 182..199 CDD:275368 4/17 (24%)
C2H2 Zn finger 207..225 CDD:275368 6/17 (35%)
C2H2 Zn finger 237..257 CDD:275368 1/19 (5%)
C2H2 Zn finger 263..284 CDD:275368 6/20 (30%)
C2H2 Zn finger 292..311 CDD:275368 4/18 (22%)
C2H2 Zn finger 352..373 CDD:275368 7/20 (35%)
CG8388NP_611075.1 zf-AD 3..78 CDD:462262
C2H2 Zn finger 264..281 CDD:275368 4/16 (25%)
C2H2 Zn finger 289..309 CDD:275368 2/19 (11%)
C2H2 Zn finger 320..340 CDD:275368 6/21 (29%)
C2H2 Zn finger 350..369 CDD:275368 5/20 (25%)
C2H2 Zn finger 440..461 CDD:275368 4/20 (20%)
C2H2 Zn finger 469..489 CDD:275368 4/21 (19%)
C2H2 Zn finger 497..515 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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