Protein Alignment repo and unc-4

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_496138.1
• Gene: unc-4 / 174544
• WormBaseID: WBGene00006744
• Length: 252
• Species: Caenorhabditis elegans
• Alignment Length: 243
• Identity: 75/243 - (30%)
• Similarity: 101/243 - (41%)
• Gaps: 52/243 - (21%)

  Fly   209 DSSPVMINGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSSTVVNGTTNGTGNANSSSSAGVGIQG 273
            |:.|.:||...|       |...||:   .:.:..||..|.....:.||...::...|.......
 Worm    10 DAEPKIINDIWA-------DFWKSQI---NSVLLNPSDGSETYLASDNGKSTSSREQSTSPDDDN 64

  Fly   274 -AAGTAGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREEL 337
             ......|:|.......|.|:        .|:::|||.|:.:||||||.|||.:.|||||.||.|
 Worm    65 LLMNEDDGIALEDDNDTGESA--------AKRRRTRTNFSGWQLEELESAFEASHYPDVFMREAL 121

  Fly   338 AIKLNLSESRVQVWFQNRRAKWRKHEPPRKTG---------YIKTSTPPTATLNPGTLAP----- 388
            |::|:|.|||||||||||||||||.|..|...         .::|...||...:..::..
 Worm   122 AMRLDLLESRVQVWFQNRRAKWRKREQNRNGSSEIKKDDGEQMETKALPTFPFSIDSILAVSRVP 186

  Fly   389 ----PFTSYPQTTTVTPPGSMDSWTSYQTPYELTPQFSLLSPAASPYG 432
                |...||:.               |....|:|....|.|...|.|
 Worm   187 RGRRPNAKYPRV---------------QACKNLSPFMIPLFPITQPGG 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	35/47 (74%)
unc-4	NP_496138.1	Homeodomain	89..145	CDD:459649	39/55 (71%)