Protein Alignment repo and LOC1278279

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: XP_061514181.1
• Gene: LOC1278279 / 1278279
• VectorBaseID: AGAMI1_005629
• Length: 664
• Species: Anopheles gambiae
• Alignment Length: 696
• Identity: 158/696 - (22%)
• Similarity: 238/696 - (34%)
• Gaps: 214/696 - (30%)

  Fly    18 PLNPLGAKPLMPTTTAMHPVMLGSVHELCSQQQQQQQQQRLPDCNTILPN----GGGGGAGSGGA 78
            ||...|:.|..|.|..:.|.:              .....||...::.|.    |....|.:.||
Mosquito    27 PLPGQGSLPPPPPTLQLSPTV--------------GLSPNLPSPGSVQPTTNLFGAAAAAAAAGA 77

  Fly    79 GGSPNYVTKLDFVNKMGCYSPSQKYEYISAPQKLVEQQQQQQHHHQHHQHYTATPPPSHNGILLH 143
            .|:.|.......|::                .:|:|..:.....:...||...
Mosquito    78 AGTANAHALAGLVSQ----------------HRLLELSRFGLRGYDLAQHMLT------------ 114

  Fly   144 KQSSQQQQQQQQQLVGILDYHPLNGKLDYSSSPK----------DQYEPQQ--------LQHLYG 190
                  ||....:|:|.|....|.|    .|.||          :||:.:.        .:.|.
Mosquito   115 ------QQGAVSKLLGTLRPPGLIG----GSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLI- 168

  Fly   191 GSPHHLDHLDHGSDGLLQDSSPVMINGGSAGGKLKKPDEMCSQL-EAGGAGVTPPSSSS-----T 249
                        |:|:..:::...::..:...:.:..:...::. .|.|.|:.||....     |
Mosquito   169 ------------SEGVCTNATAPSVSSINRILRNRAAERAAAEFARAAGYGLYPPPPYGGFPWPT 221

  Fly   250 VVNGTTNGTGNANSSSSAGVGIQGAAGTAG-GVAAPAAKKDGS---------SSKKKGDPNGIKK 304
            ..:..:.|.|..|.|...|....|..|:.| |........||:         |:...||..  |.
Mosquito   222 PTHLWSPGQGMPNMSQPGGSTTPGTIGSPGSGSHETLGSPDGNRLIDIEGEDSNSLDGDQP--KF 284

  Fly   305 KKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTG 369
            ::.||||:..||||||:.|:::.||.|..||.||.:.:|||:||||||.|||||||:|:   :..
Mosquito   285 RRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLASRTSLSEARVQVWFSNRRAKWRRHQ---RMN 346

  Fly   370 YIKTSTPPT-----------ATLNPGTLAPPFTSYPQTTTVTPPGSMDSWTSYQTPYELTPQFSL 423
            .:|.||.||           :...||:..||  ..||.....||      |:...|...:|...|
Mosquito   347 LLKRSTSPTTRAAAAAGTASSAFTPGSPPPP--PPPQQQQQQPP------TAGSQPPGTSPSAQL 403

  Fly   424 LSPAASPYGTYSG---------------QYGAYVHESQLFPMRHYEY-----------------G 456
            ...:.||.|..:.               .:.|:.|.....|:.|..:                 |
Mosquito   404 APSSGSPGGAAAPPHHHHLPPHLAGVHLPHHAHHHHHPHHPLTHPHHHALHSHHFHQGASAHPGG 468

  Fly   457 SPTRMEMGATTGSVAG-----NGDESVANGGSYQ----------TAELQTAQQ---QQLADGTLV 503
            ||      :|.|.:||     :......:.|::|          .|:.|.|.|   |.|......
Mosquito   469 SP------STGGQLAGAPHPHHHPHHPGHHGAHQLHANPPATSPAAQAQAAAQAAAQALGAQAAA 527

  Fly   504 TVHAHQQQQQQQQQLNGKYLSAEEAKYVHLQCHQSGGGLELSPGASCHLVEAQGQHY-VTTATGG 567
            .|.|.|..|..........:..|.:.:           ..|.|.::..|.....:.| .||.:..
Mosquito   528 AVAAAQAAQSLVTASTPLLMGGEHSAF-----------RSLVPTSAAALFAGLSRSYAATTGSSN 581

  Fly   568 AASAGGTSSDDNDSGGMQTVIKSEEVS---------QQQQQQQGQS 604
            ..||....|||:|          ||::         |||||.:|||
Mosquito   582 LDSASPPPSDDSD----------EEINVHEDDSNDEQQQQQTEGQS 617

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	29/47 (62%)
LOC1278279	XP_061514181.1	None