Protein Alignment repo and sebox

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: XP_004911692.2
• Gene: sebox / 100497846
• XenbaseID: XB-GENE-853158
• Length: 275
• Species: Xenopus tropicalis
• Alignment Length: 264
• Identity: 70/264 - (26%)
• Similarity: 109/264 - (41%)
• Gaps: 59/264 - (22%)

  Fly   278 AGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLN 342
            |.|:   .||.:|:.  ..|.|:|.:|:| ||.::.:|..|||..|...||||:..||:||..:.
 Frog    30 AAGI---LAKPEGAG--LNGSPSGQRKRK-RTLYSKWQQLELESVFAIVPYPDISTREQLAKIIR 88

  Fly   343 LSESRVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATLNPGTLAPPFTSYPQTTTVTPPGSMDS 407
            |.||:||||||||||:..|.....::.|.:.|:...:.|:..:.:|| .:|.|         .|.
 Frog    89 LPESKVQVWFQNRRARKNKSGKLDRSLYRRGSSVRLSHLSLHSQSPP-QNYSQ---------RDP 143

  Fly   408 WTSYQTPYELTPQ--------FSLLSPAASPYGTYSGQYGAYVHESQLFPMRHYEYGSPTRMEMG 464
            ..:.|.|.....|        .::..|...||           :|..|.|:..| .|...:.:
 Frog   144 LITMQCPQNKPVQHGSEGHKYIAIQQPLFDPY-----------NELSLPPLEQY-VGMEEKEQ-- 194

  Fly   465 ATTGSVAGNGDESVANGGSYQTAELQTAQQQQLADGTLVTVHAHQQQQQQQQQLNGKYLSAEEAK 529
            .|.|..|...:....|..|            ..::.||..|...|.:         ||::..:..
 Frog   195 CTYGQNAFYWENMAENSNS------------SASEPTLYNVPFVQLE---------KYMNCSQMS 238

  Fly   530 YVHL 533
            |:.:
 Frog   239 YLEM 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	26/47 (55%)
sebox	XP_004911692.2	Homeodomain	51..104	CDD:459649	29/53 (55%)