Protein Alignment SrpRalpha and CPSRP54

DIOPT Version :10

• Sequence 1: NP_524887.2
• Gene: SrpRalpha / 47251
• FlyBaseID: FBgn0010391
• Length: 614
• Species: Drosophila melanogaster
• Sequence 2: NP_196014.1
• Gene: CPSRP54 / 830273
• AraportID: AT5G03940
• Length: 564
• Species: Arabidopsis thaliana
• Alignment Length: 309
• Identity: 85/309 - (27%)
• Similarity: 149/309 - (48%)
• Gaps: 35/309 - (11%)

  Fly   295 GGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMGTFDSIA 359
            |||.:.:..:.|.:.::..::...:..:|..|:..:|:..:..:...||:....|  ||....:.
plant    83 GGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVG--MGVIRGVK 145

  Fly   360 --SQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIEN 422
              .|:.:.:.:.||:::..:      ...|:..::| |..|:..|:.||||:|..||:..:|.:.
plant   146 PDQQLVKIVHDELVKLMGGE------VSELQFAKSG-PTVILLAGLQGVGKTTVCAKLACYLKKQ 203

  Fly   423 DFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAH 487
            ..:.::.|.|.:|..|::||......:.             |.:|..|.....|.||.:.:|.|.
plant   204 GKSCMLIAGDVYRPAAIDQLVILGEQVG-------------VPVYTAGTDVKPADIAKQGLKEAK 255

  Fly   488 DTRVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSS 552
            ...||||::|||||:|.::.:|..|..:.|..||..||.|.:|:.|.||...:..||..:.
plant   256 KNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIG---- 316

  Fly   553 NENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLK 601
                  |.|.:|||.|. |.:.|||:|:..::|:||..||.|:...||:
plant   317 ------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDLE 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SrpRalpha	NP_524887.2	SRP-alpha_N	28..267	CDD:461165
		FlhF	<258..500	CDD:274609	48/206 (23%)
		SRalpha_C	396..612	CDD:349785	67/206 (33%)
CPSRP54	NP_196014.1	Ffh	77..499	CDD:440307	85/309 (28%)