DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolZ1 and AT1G49180

DIOPT Version :10

Sequence 1:NP_524881.2 Gene:PolZ1 / 47186 FlyBaseID:FBgn0002891 Length:2130 Species:Drosophila melanogaster
Sequence 2:NP_175344.2 Gene:AT1G49180 / 841341 AraportID:AT1G49180 Length:408 Species:Arabidopsis thaliana


Alignment Length:521 Identity:97/521 - (18%)
Similarity:162/521 - (31%) Gaps:210/521 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1190 AKDKCKATPTS----SKARETGK---------SRLKRGTR------LSFIGSQDEEPPS------ 1229
            ||.|...:.||    :|.:.||:         |:|.|..|      |.|:.|.|.  |:      
plant     9 AKSKLSESLTSTVWLAKHKLTGEEAVMKCFDLSKLNRNLRDCLNNELEFLSSVDH--PNIIRLLH 71

  Fly  1230 -SQSSE--------------QSVSSSAAQAELD-RSSFLRQLEGSSQDRQHDLSFGLSHATLDNT 1278
             ||..:              .|......:.|.| ...|::|: |:..:..||             
plant    72 VSQDDDFLVMVLEYCDGGTLSSYIQRYGRVEEDIAKRFMKQI-GAGLEIIHD------------- 122

  Fly  1279 FGFKVNLENLQQAKADIDCNHLTIITLEVFVSTRGDLQP-----DPMHDE--IRCLFYAIEHSLP 1336
                               ||:          ...||:|     |...|:  ::...:::...|.
plant   123 -------------------NHI----------IHRDLKPENILIDGSGDDLVLKIADFSLARKLH 158

  Fly  1337 DEKLPSKACG---YIMVNTVQ--------DLLSEG-----------PFHGIDRDIEV--QVVTSE 1377
            ..|.....||   |:....:|        |:.|.|           ||.| :.:::|  .:.:|.
plant   159 PGKYLETVCGSPFYMAPEVLQFQRYNEKADMWSVGAILFELLHGYPPFRG-NNNVQVLRNIKSST 222

  Fly  1378 AEAFEALLALCERWDADIYAGYEIEMSSWGYVIDRAKHLCFNIAPLLSRVPTQK--VRDFVDEDR 1440
            |..|..|  :.::...|.     |::.|....|:.|..|.....|.|.|:...:  |:|.....|
plant   223 ALPFSRL--ILQQMHPDC-----IDVCSRLLSINPAATLGIEDFPFLGRIKNSRVWVKDTTFSSR 280

  Fly  1441 EQFTDLDVEMKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWFGSPCTR 1505
            :..|.......:.||:..|    :..:..|.....||:||                         
plant   281 QHGTRERKVATINGRLQFD----LSQDAYLPQRLLENLMY------------------------- 316

  Fly  1506 WIVMEYYLERVRGTLTLLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPK---- 1566
                                   :..|.|||::.|:....::|||...:|.|.:||.||.|    
plant   317 -----------------------IYNTIEMARVTGVPTSYLISRGESIKVLSQLLRKAKQKTWFF 358

  Fly  1567 ------NLVPLSPSVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMII-----AYNY 1620
                  ||        .:..|:...|:...:.|...|        .:.|:..:::|     .|::
plant   359 QMLRSWNL--------NKELMKVQLYVGGFISPTYSF--------TYSSITSNILINISNDIYSH 407

  Fly  1621 C 1621
            |
plant   408 C 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolZ1NP_524881.2 PTZ00166 20..>196 CDD:240301
DNA_polB_zeta_exo 1297..1518 CDD:99821 45/253 (18%)
POLBc_zeta 1550..2000 CDD:99917 18/87 (21%)
zf-C4pol 2041..2107 CDD:464119
AT1G49180NP_175344.2 STKc_ATG1_ULK_like 13..261 CDD:270911 54/300 (18%)
PTZ00166 <248..>354 CDD:240301 32/157 (20%)
Blue background indicates that the domain is not in the aligned region.

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