DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PolZ1 and PolA1

DIOPT Version :10

Sequence 1:NP_524881.2 Gene:PolZ1 / 47186 FlyBaseID:FBgn0002891 Length:2130 Species:Drosophila melanogaster
Sequence 2:NP_536736.2 Gene:PolA1 / 42553 FlyBaseID:FBgn0259113 Length:1488 Species:Drosophila melanogaster


Alignment Length:387 Identity:81/387 - (20%)
Similarity:147/387 - (37%) Gaps:96/387 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KKLNNVAAAAVATAVVGPGDESSSSELGASIDTTDKESGIGGGSVGGSGGGSAAAGASDEDPECE 111
            :|.|..||||.|......|   :::..||: |.....|..||.:..|....::.....||..:.:
  Fly   784 RKANETAAAAAAETAKKDG---TAAAAGAA-DGKSGRSEQGGETSNGEDSKASTEKGKDEKEQND 844

  Fly   112 ERSSAVIFAVVRDGEKDTYGGGVQ-EPASTLTTLTEI----------RCDAIQEE---------- 155
            .:..       |...:|.:....: |||...|.|.|:          :|..|.|:          
  Fly   845 RKRR-------RRSVEDNHRSKPEPEPARFHTVLPELLLAFAYFDITQCGYIFEKDLLELIYSLG 902

  Fly   156 ------RTRANNSNTTTTNQQLQLVKVTTVSVERKVSNGQRGSGSGGGGVGGGPGPGGGMLIASK 214
                  :.|....:.......|...::|..:::...::|:......||.|      ...:.:::.
  Fly   903 LNLSRSQIRKTVGDVAAARHTLYYRQLTDKALDVAAADGKAPKKGDGGEV------PPSVDLSAD 961

  Fly   215 SVTSAGTAARNLSKNMADVVPKVLEKKNISSEGLIKFLKSKVAILQTELEAS--QKQNEANVKDL 277
            |:|...|||..|::..|    ..|.:.|....|.:     ..::||.....|  |:|:|...|  
  Fly   962 SLTGGETAAAELTEQQA----LELARGNTDYMGQL-----HASVLQIANGGSEQQRQDEPAAK-- 1015

  Fly   278 NLALDRLKQLEAVKEQLLTKNGALERTVKKYEERNVELDKLLKEKDAQLNVSAKELYGARSEIRN 342
                 ::|...|..|...|.:|.:|     |:...|::.|.|::  |:|...|:|    |:|   
  Fly  1016 -----KVKMETAANELPTTADGLVE-----YKGTIVDVGKCLEQ--AKLTEQARE----RAE--- 1061

  Fly   343 LANHNQTQDRRLLKAQEEVESLRIKLSIAND------SEKVSETRDAARQERLTYEKQIRQL 398
                         |:.|.|.:|..:|:..|.      ||.|::.: :|:::.:..|:.||.:
  Fly  1062 -------------KSLELVRNLNDELTGTNARSTQYISELVADLK-SAKKKLIDNEQTIRDM 1109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolZ1NP_524881.2 PTZ00166 20..>196 CDD:240301 32/175 (18%)
DNA_polB_zeta_exo 1297..1518 CDD:99821
POLBc_zeta 1550..2000 CDD:99917
zf-C4pol 2041..2107 CDD:464119
PolA1NP_536736.2 pol2 52..1237 CDD:273159 81/387 (21%)
zf-DNA_Pol 1286..1459 CDD:462651
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.