DRSC/TRiP Functional Genomics Resources

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Protein Alignment Men and Menl-2

DIOPT Version :10

Sequence 1:NP_524880.2 Gene:Men / 47173 FlyBaseID:FBgn0002719 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001027424.2 Gene:Menl-2 / 3772692 FlyBaseID:FBgn0029153 Length:600 Species:Drosophila melanogaster


Alignment Length:540 Identity:234/540 - (43%)
Similarity:342/540 - (63%) Gaps:2/540 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LLDKRYSKGLAFTHEERQQLGIHGMLPYVVREPSEQVEHCRALLARLDQDLDKYMYLISLSERNE 286
            :::.:|:||||||.:|||:|||.|::|..||...:|:....|.......|:.::.||.::..|:.
  Fly    42 VMNGKYNKGLAFTIKERQRLGIMGLMPCSVRSMDDQMNAALANFEARPTDIARFTYLSAVHHRHR 106

  Fly   287 RLFYNVLSSDIAYMMPLVYTPTVGLACQRYSLIHQNAKGMFISIKDKGHIYDVLKNWPETDVRAI 351
            ||:|..:..:|...:|:|||||||.....|.|..|.|..:||||.|||||.|::.||.:..|:||
  Fly   107 RLYYRFIKENIEKSLPIVYTPTVGDVVATYGLNFQQAISLFISIHDKGHIRDLMHNWVDEGVKAI 171

  Fly   352 VVTDGERILGLGDLGANGMGIPVGKLSLYTALAGIKPSQCLPITLDVGTNTESILEDPLYIGLRE 416
            .||||.|:|||||:|||.|||.:||:.|||||..|.||..:|:.|||||:.:::|:||||:|.|.
  Fly   172 CVTDGGRVLGLGDMGANAMGISLGKMILYTALGSIPPSTLMPVCLDVGTDNQALLQDPLYVGARI 236

  Fly   417 RRATGDLYDEFIDEFMHACVRRFGQNCLIQFEDFANANAFRLLSKYRDSFCTFNDDIQGTASVAV 481
            .|..|..|||.:||||.:.|:.||.|..|.|||||..||.:.|.||:..:|.||||||||.:..:
  Fly   237 PRVKGPEYDELVDEFMESAVKCFGNNTFIHFEDFATPNALKFLEKYQYKYCCFNDDIQGTGATGL 301

  Fly   482 AGLLASLKIKKTQLKDNTLLFLGAGEAALGIANLCLMAMKVEGLTEEEAKARIWMVDSRGVITRD 546
            |..:...:|...:|:|...||:|||.|||||||:..|.::|.|:..|||...|:::|..|::|.:
  Fly   302 AAFINVERITGRKLEDTVFLFVGAGSAALGIANMLAMELEVRGIPAEEATKNIYLMDVNGILTPE 366

  Fly   547 RPKGGLTEHKLHFAQLHEPIDTLAEAVRKVRPNVLIGAAAQGGAFNQEILELMADINETPIIFAL 611
            .|..  .|....|.:..||:..:...::|::|:||:||...||.||:|:|:.||..:|.|.:|.|
  Fly   367 SPNP--PEMGKIFIKSMEPMKDMMAVLKKLKPSVLVGATGVGGIFNEEVLKTMAKNHERPAVFPL 429

  Fly   612 SNPTSKAECTAEEAYTYTKGRCIFASGSPFAPVTYNNKKFYPGQGNNSYIFPGVALGVLCAGMLN 676
            ||||:.:|||||:|:|:|:||.:|.|||||.||..|.|::.|.|.||...|||:||..:.|....
  Fly   430 SNPTANSECTAEQAFTHTEGRVLFGSGSPFPPVVINGKRYRPAQANNCLTFPGIALAAITAKARY 494

  Fly   677 IPEQVFLVAAERLAELVSKDDLAKGSLYPPLSSIVSCSMAIAERIVEYAYKNGLATVRPEPVNKL 741
            :|.:||.|.:..||....::.|.:|:|:||:....:.:..:...:.:|...|.|:.|.|:|.:..
  Fly   495 LPNEVFSVVSHELARNTPQELLDEGTLFPPIKDAHNVAFNVGVAMTQYLIDNDLSNVYPKPDDIC 559

  Fly   742 AFIKAQMYDLDYPRSVPATY 761
            .|:|..:|..||..|:|.|:
  Fly   560 EFVKRSLYKFDYRNSLPTTW 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MenNP_524880.2 PLN03129 213..757 CDD:215594 231/534 (43%)
Menl-2NP_001027424.2 PLN03129 8..573 CDD:215594 231/532 (43%)

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